Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01665 ATGGAGGCTTTTGTGTTTGTGTTTGTGTTTGTGGCCCTTGTGTTGTGTGGTTGTGCTGCTGGTAAAGAGTGCACGAACTTTCCTACACAATCACACACGCTTAGGTACCAGCTATTGACATCTAAGAATGGAAGGTTGGAGGAAGAGGCGATGTCTCACTCACATTTGACGCCAACCGATGAATCTGCTTGGGCTGACTTGCTGCCGAGGAAGTTCTTGTCAGAACAACACCAACATGATTGGGCGGTTATGTATAAGAAAATAAAGAACATGGGTGTGTTCAAGTCACCTGAAGGCTTTCTCAAAGAAGTGCCTCTTCAGGATGTGAGGTTGCATGAGGATTCCATCCATGGTCGAGCACAGCAGACAAATTTGGAGTATCTGTTGATGTTGGATGTGGACAGGATGATTTGGAGCTTTAGGAAGACGGCTGGTCTATCCACTCCTGGGACTCCTTATGGAGGGTGGGAAGGTCCAGAAGTTGAGCTCCGTGGTCATTTTGTAGGGCATTACTTGAGTGCATCAGCTCTAATGTGGGCCAGCACACAGAATGATAGCTTGAAACAGAAAATGTCATCCCTTGTTGCTGGTCTGTCTGCCTGTCAGGAGAAAATTGGAACTGGATATCTATCTGCATTTCCGTCTGAGTTATTTGATCGATTTGAAGCTGTTCTAGAAGTTTGGGCTCCATATTACACCATTCACAAGATCTTGGCCGGCCTCTTGGATCAACATACTTTTGCTGGAAACCCTCAAGCTCTAAAAATGCTAACATGGATGGTTGATTACTTCTACAACAGAGTGCAGAATGTAATAACTAAGTACACTTTAAGTAGACACTATGAATCACAGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAAATTATACAGCATAACAGGAGATTCTAAGCATCTATTGTTAGCTCACCTTTTTGATAAGCCATGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATAGCTGATTTTCATTCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGGTATGAAATCACAGGCGATCCACTTTATAAGGAAATTGGGACATTCTTTATGGACATCATAAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAGTCGGCGAGTTCTGGAGTGATCCAAAGAGAATGGCAGATAATTTAAAAACGACAGAGAACGAAGAATCATGCACAACTTATAATATGTTGAAGGTTTCACGCCACCTGTTTAAATGGACCAAAGAAGTCTCTTATGCAGACTATTATGAGCGTGCCTTGACCAATGGTGTGCTCGGCGTTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCATTGGGTCTTGGGGTTTCCAAGGCTAAAACTTACCATAGTTGGGGAACACCATTTGACTCTTTCTGGTGCTGCTATGGAACGGGAATTGAATCGTTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGGCAAAGATCCTACGCTTTACATCATTCAGTACATATCAAGCTCATTTAATTGGAAATCTGGCAAAATTTTGCTCAATCAGACAGTTGTTCCAGTTGCTTCATGGGATCCTTACCTACGAGTGACATTTACGTTTTCTCCTGTTGAGAATAATTTGTCTACATTGAACTTTCGACTCCCAACTTGGACTCGTCTGGATGGTGCTGACGGGATATTAAATGCTGAAACTTTATCTCTGCCAACTCCAGGAAATTTTTTGTCAATCACAAGACAATGGAGTGCTAGTGACAAGCTGACCCTTCAGCTGCCCCTTACCGTAAGGACAGAGTCCATAAAAGATGACAGGCCTGAATATGCCTCTGTTCAAGCAATTCTTTATGGTCCTTATCTTCTTGCGGGTCATACAACTGGTGGTGATTGGGACCTTAAAGCTGGGGCTAACAATGCAGACTGGATTACTCCTATTCCTGCCAGTCACAATAGTCAACTAGTTTCTTTTTCCCAAGACTTTGAAAATTCAACTTTTGTTTTGGCAAATTCAAACCAATCACTTTCAATGCAAAAATTGCCTGAATCTGGCACTGACTTGGCTCTTCAGGCAACCTTTAGGCTTGTCCTAAATGAGTCTTTCTCAAAGTTTTCAACATTGGCAGATGCTAATGGTAAATCAGTGATGTTAGAACCATTTGATTTTCCTGGAATGAATGTGATTCACCAAGGAGCAGACAAACCTCTTCTCATTGTAGATTCTTCCCATGACGGGCCATCTTCGGTTTTTCTTGTGGTACTGGGATTGGATGGACGAAATGAAACCATATCTTTAGAATCCCAGAGCAACAAGGGCTGTTATGTGTATAGTGGTTTGAGTTCTAGTGCAGGAGTCAAGCTCAGTTGCAAATCTGATTCTGATGCTACTTTTAACCAAGCAACAAGCTTTGTTGCTCAAAAAGGATTGAGCCAATACAATCCTATCAGTTTTGTGGCTAAAGGGGCAAACAGGAATTTTCTTTTGGAGCCATTATTCTCATTCAGAGACGAGCATTATACAGTTTATTTCAACATTCAAGGTTGA 2565 0.4203 MEAFVFVFVFVALVLCGCAAGKECTNFPTQSHTLRYQLLTSKNGRLEEEAMSHSHLTPTDESAWADLLPRKFLSEQHQHDWAVMYKKIKNMGVFKSPEGFLKEVPLQDVRLHEDSIHGRAQQTNLEYLLMLDVDRMIWSFRKTAGLSTPGTPYGGWEGPEVELRGHFVGHYLSASALMWASTQNDSLKQKMSSLVAGLSACQEKIGTGYLSAFPSELFDRFEAVLEVWAPYYTIHKILAGLLDQHTFAGNPQALKMLTWMVDYFYNRVQNVITKYTLSRHYESQNEETGGMNDVLYKLYSITGDSKHLLLAHLFDKPCFLGLLAVQANDIADFHSNTHIPVVVGSQMRYEITGDPLYKEIGTFFMDIINSSHSYATGGTSVGEFWSDPKRMADNLKTTENEESCTTYNMLKVSRHLFKWTKEVSYADYYERALTNGVLGVQRGTDPGVMIYMLPLGLGVSKAKTYHSWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGKDPTLYIIQYISSSFNWKSGKILLNQTVVPVASWDPYLRVTFTFSPVENNLSTLNFRLPTWTRLDGADGILNAETLSLPTPGNFLSITRQWSASDKLTLQLPLTVRTESIKDDRPEYASVQAILYGPYLLAGHTTGGDWDLKAGANNADWITPIPASHNSQLVSFSQDFENSTFVLANSNQSLSMQKLPESGTDLALQATFRLVLNESFSKFSTLADANGKSVMLEPFDFPGMNVIHQGADKPLLIVDSSHDGPSSVFLVVLGLDGRNETISLESQSNKGCYVYSGLSSSAGVKLSCKSDSDATFNQATSFVAQKGLSQYNPISFVAKGANRNFLLEPLFSFRDEHYTVYFNIQG 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01665 854 SUPERFAMILY AbfB domain 719 835 IPR036195 GO:0046373|GO:0046556
Pumo11g01665 854 SUPERFAMILY Six-hairpin glycosidases 146 476 IPR008928 GO:0005975
Pumo11g01665 854 Pfam Beta-L-arabinofuranosidase, GH127 108 630 IPR012878 -
Pumo11g01665 854 Gene3D - 713 844 - -
Pumo11g01665 854 PANTHER PROLINE-TRNA LIGASE (DUF1680) 19 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01665 Pumo-Chr11 48037389 48044397 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01665 K09955 - gmx:100791803 1601.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01665 11 48037389 48044397 Pumo4g04046 4 81159636 81164223 PCT