Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01663 ATGAATCTGCTTGGGCTGATTTGCTGCCTAGGAAGTTCTTGTCAGAACAACACCAACATGATTGGGGGGATTATGTATAAGAAAATTAAGAACATGGGTGTGTTCAAGTCACCTGAAGGTTTTCTCAAAGAAGTGCCTCTTCAGGATGTGAGGTTGCATGAAGATTCCATCCATGGTAGAGCACAGCAGACAAACTTGGAGTATCTGTTGATGTTAGATGTGGACAGGTTGATTTGGAGCTTCAGGAAGACAGCTGGTCTAGCCACTCCTGGAACTCCTTATGGAGGGTGGGAAGATCCAAATGCTGAGCTCAGGGGTCATTTTGTTGCTTTGACAGATCTTGGCTGGCCTCTTGGATCAGGCATACTTTTGCTGGAAACCCTCAAGCTCTAA 393 0.4555 MNLLGLICCLGSSCQNNTNMIGGIMYKKIKNMGVFKSPEGFLKEVPLQDVRLHEDSIHGRAQQTNLEYLLMLDVDRLIWSFRKTAGLATPGTPYGGWEDPNAELRGHFVALTDLGWPLGSGILLLETLKL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01663 130 PANTHER PROLINE-TRNA LIGASE (DUF1680) 24 109 - -
Pumo11g01663 130 Pfam Beta-L-arabinofuranosidase, GH127 49 109 IPR012878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01663 Pumo-Chr11 48029177 48030066 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01663 K09955 - gmx:100791803 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04046 4 81159636 81164223 Pumo11g01663 11 48029177 48030066 PCT