Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03353 ATGGATAGAGTTAAGGACTTGGCATCAAAGAAGGCTGCTGTTATATTTACCAAGAGTTCATGTTGCATGTGTCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAGGGAAATGGAGTGGGCTTTAAGGGGTATGGGCTGTAACCCTTCAGTCCCAGCAGTGTTCATAGGTGGAAAATTTGTGGGCTCATCCAAAGATGTCATATCCCTCCATGTTGATGGCTCTCTCAAGCAATTGCTCATTGATGCAAAAGCTATCTGGTTTTAG 309 0.4434 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALRGMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLIDAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03353 102 Pfam Glutaredoxin 14 75 IPR002109 -
Pumo5g03353 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Pumo5g03353 102 CDD GRX_GRXh_1_2_like 12 93 - -
Pumo5g03353 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Pumo5g03353 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Pumo5g03353 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Pumo5g03353 102 Gene3D Glutaredoxin 1 100 - -
Pumo5g03353 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Pumo5g03353 102 NCBIfam glutaredoxin-like family 4 101 IPR011905 -
Pumo5g03353 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03353 Pumo-Chr5 82655422 82656032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03353 1 102 Miscellaneous Gene Families AT4G15700 49.020 1.30e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03353 K03676 - gmx:100788094 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03353 5 82655422 82656032 Pumo5g03353 5 82655422 82656032 ECH
Pumo5g03353 5 82655422 82656032 Pumo3g02269 3 34734568 34736160 PCT
Pumo3g02270 3 34774844 34775706 Pumo5g03353 5 82655422 82656032 PCT