Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01363 ATGGTTGAATCTCAGCCCAAGTTCTTCATCCCGGACTCCATCAATGGCGTGAATTTCGACGTGGCGGCGCAGATTCGAATGGTGTGGGAAGTGATCAAGGCGCCACTGATCGTGCCTCTGCTCAACCTCGCAGTGTACATTTGTCTCGCAATGGCCCTCATGCTCTTCATGGAGAGGGTCTACATGGGCATTGTCATCATCCTTGTCAAACTCTTCTGGAAGAAACCGCACCAGCGCTACAGGTTCGAGCCCCTCCAAGAAGATGAGGAACTTGGAAACACCAATTTCCCCGTCGTGCTTGTGCAGATTCCAATGTTCAATGAAAAAGAGGTGTACAAGGTGTCGATTGGAGCGGCTTGTAATCTTTCATGGCCTGCGGATCGTCTCGTGATCCAAGTGCTCGACGATTCTACTGACCCTACCATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCTAGCAAGGGAATAAACATAGTGTACCAAATCAGAGAAACGAGAGGAGGGTACAAAGCTGGTGCTCTAAAAGAAGGCCTAAAACGTAACTATGTGAAGCACTGCGAGTACGTGGCGATTTTCGATGCAGATTTCAGGCCAGAGCCAGATTTTCTGAGACGTTCCATTCCTTTCTTGGTGGGCAACCCCGACATTGCTCTTATTCAAGCTCGTTGGAGATTCGTGAATGCTGATGAATGTATTTTGACAAGAATGCAAGAGATGTCCCTGGATTACCATTTCACAGTAGAGCAAGAAGTTGGATCAGCCACTCATGCTTTCTTCGGTTTCAACGGAACTGCTGGTATTTGGAGAATAGCTGCTATCAATGAAGCTGGTGGGTGGAAAGACAGAACAACAGTTGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTCCAGGCCAAAAGTGAGCTTCCCAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACAGATGGTCTTGTGGTCCTGCAAATTTGTTCCGCAAAATGGTGATGGAAATTGTGAGGAACAAGAAAGTTAGGTTTTGGAAGAAAGTGTACGTTATCTACAGCTTCTTCTTTGTTCGCAAAATCATAGCCCACATGGTCACTTTCTTCTTCTACTGTGTTGTGATTCCCCTCACAATTTTGATCCCTGAGGTTCATGTTCCAATCTGGGGAGCTGTTTATATTCCTTCTGTCATCACCATTCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTTTGCACCGTACCAAGGCAACATTTATAGGTCTCTTAGAATATGGGAGGGCTAATGAATGGGTTGTAACTGAAAAACTTGGTGACTCTGTCAACAATAATAAAAAGGATAAATCAGGAGATGCTGCCAAGAAGAATAATGCCATCAAGGCCACCCCCAAAAAGACTCGATCCAAATTTGTTGAAAGGTCAGTTTCTTAA 1491 0.4541 MVESQPKFFIPDSINGVNFDVAAQIRMVWEVIKAPLIVPLLNLAVYICLAMALMLFMERVYMGIVIILVKLFWKKPHQRYRFEPLQEDEELGNTNFPVVLVQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPTIKQMVEMECQRWASKGINIVYQIRETRGGYKAGALKEGLKRNYVKHCEYVAIFDADFRPEPDFLRRSIPFLVGNPDIALIQARWRFVNADECILTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVIPLTILIPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNNNKKDKSGDAAKKNNAIKATPKKTRSKFVERSVS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01363 496 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 377 IPR029044 -
Pumo11g01363 496 MobiDBLite consensus disorder prediction 461 496 - -
Pumo11g01363 496 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Pumo11g01363 496 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 478 - -
Pumo11g01363 496 Pfam Glycosyl transferase family group 2 190 393 IPR001173 -
Pumo11g01363 496 CDD CESA_CaSu_A2 97 333 - -
Pumo11g01363 496 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 316 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01363 Pumo-Chr11 43641308 43646658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01363 5 484 Miscellaneous Gene Families AT5G22740 82.328 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01363 K13680 - gmx:100791645 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01363 11 43641308 43646658 Pumo11g01363 11 43641308 43646658 ECH
Pumo5g03135 5 80119795 80125775 Pumo11g01363 11 43641308 43646658 ECH
Pumo3g03148 3 57943922 57950471 Pumo11g01363 11 43641308 43646658 ECH