Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02362 ATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGCTTGCCAGCACATAAACTTCAAGAAGAGGGATGCATGCCAAAGTTGTGGATACCCCAAATTTGGAGGCCCTGACCCAACAACATACAGATACAACTGGACTGAGGCCTTGGCAGGGGACTGGTATTGCACTGCTATGAACTGTGGAGCTCACAACTATGCCAGCAGATCAAGCTGCTATAGATGTGGGGCATTGAGAGATGGTTACTCTTGTAGATTTGGGGGAAACATGGATGACTCTGGAGGATATGGTTCTGATTGCAATTATCCCCCAGGGTGGAAAACTGGTGACTGGATTTGCACTAGAATTGGATGTGGAGTGCATAACTATGCCAGCAGGACAGAATGCTTCAAGTGCAAAACACCAAGAAATTTTGGTGAGAATAAGCTTAGCCTTCATTAA 435 0.4644 MSWSGGDWMCGACQHINFKKRDACQSCGYPKFGGPDPTTYRYNWTEALAGDWYCTAMNCGAHNYASRSSCYRCGALRDGYSCRFGGNMDDSGGYGSDCNYPPGWKTGDWICTRIGCGVHNYASRTECFKCKTPRNFGENKLSLH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02362 144 SUPERFAMILY Ran binding protein zinc finger-like 49 79 IPR036443 -
Pumo10g02362 144 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Pumo10g02362 144 PANTHER ZINC FINGER PROTEIN 49 138 - -
Pumo10g02362 144 FunFam Ran-binding zinc finger protein 99 135 - -
Pumo10g02362 144 SMART zf_4 50 76 IPR001876 -
Pumo10g02362 144 SMART zf_4 6 30 IPR001876 -
Pumo10g02362 144 SMART zf_4 107 133 IPR001876 -
Pumo10g02362 144 ProSitePatterns Zinc finger RanBP2-type signature. 52 73 IPR001876 -
Pumo10g02362 144 SUPERFAMILY Ran binding protein zinc finger-like 101 136 IPR036443 -
Pumo10g02362 144 ProSitePatterns Zinc finger RanBP2-type signature. 109 130 IPR001876 -
Pumo10g02362 144 Pfam Zn-finger in Ran binding protein and others 105 134 IPR001876 -
Pumo10g02362 144 Pfam Zn-finger in Ran binding protein and others 49 77 IPR001876 -
Pumo10g02362 144 ProSiteProfiles Zinc finger RanBP2 type profile. 48 79 IPR001876 -
Pumo10g02362 144 SUPERFAMILY Ran binding protein zinc finger-like 3 34 IPR036443 -
Pumo10g02362 144 ProSiteProfiles Zinc finger RanBP2 type profile. 105 136 IPR001876 -
Pumo10g02362 144 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Pumo10g02362 144 Gene3D - 98 136 - -
Pumo10g02362 144 Gene3D - 1 35 - -
Pumo10g02362 144 Gene3D - 44 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02362 Pumo-Chr10 34618110 34620347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02362 - - gmx:100792208 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01091 4 14030611 14031682 Pumo10g02362 10 34618110 34620347 PCT
Pumo10g02362 10 34618110 34620347 Pumo4g01090 4 14019078 14021091 PCT