Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01802 ATGGCTTTGTCTCGTAGGTCATGTTTGTCTTTTTTTTTCTTATTGTTTCCAGTTCTAAGAATTGGGTTCGCTTTGGACATGTCAATTATTGACTATGATGCCTCACACGGTCAACAAGTACCGAACGAGTCGAGGACTGAAACCCAGATGAGGGCAATGTATGAAGCTTGGTTAGTCAGGCATGGTAAAGCGTACAATGCATTGGGAGAGAAAGAAAGGCGGTTTGAGATCTTCAAGGATAACCTTAGGTTCATTGACGAGCATAACAAGGTGGAGGGTCGCACTTTCAAGTTGGGATTGAACAAGTTTGCTGACTTGACCAATGAGGAGTACAGGGATGTTTTCCTGGGTACCAAAATGAATAGAACCAGAGCTCTGCTTTCTGGGTCTAGAAAGAGCGGTCGTTATGCTGTTAGAGTCGGTGACCAATTGCCCGAATCTGTGGATTGGAGAGAGAAAGGTGCTGTGGTTCCTGTTAAGGATCAAGATCAATGCGGGAGTTGCTGGGCGTTCTCAACTGTTGGTGCTGTAGAAGGGATTAATCAAATTGTAACCGGTGATCTAATCTCCTTGTCGGAGCAGGAACTGATTGACTGTGACAAATCATACAATCAGGGTTGCAATGGAGGTCTCATGGACTATGCCTTTGAATTTATCATAAAAAATGGAGGGATTGATACTGAAGACGACTACTCGTACAAAGCCCGGGATGGTGTTTGTGATCCAACCAGGAAAAATGCTCACGTAGTCACCATTGATGGATATGAAGATGTTCCTGAAAACAATGAGAAAGCCTTGAAGAAGGCAGTGGCAAACCAACCTGTTAGTGTCGCCATTGAAGCCGGTGGCAGAGCTTTCCAACTATATCAATCGGGTGTTTTCACCGGCACGTGTGGAACTGAGCTTGACCATGGTGTGGTGGTGGTTGGATATGGAACTAAGATCGGCAAAGATTACTGGATTGTGAGGAACTCTTGGGGTCCCAACTGGGGTGAGAATGGCTACATCAAGATGGAGCGGAATGTGGTTAGCACAACTGGAAAATGTGGGATAGCAATGGAGGCCTCGTATCCTGTCAAGAAGGGTCAGAATCCCCCTAAACCTGGTCCTTCTCCTCCATCTCCTGTAAAACCTCCTTCTGTATGTGATGCTTACTACTCTTGTCCCTCTGGAAGCACTTGCTGCTGCGTATATCCATATGGAGACTTTTGCCTTGGATGGGGATGCTGCCCTCTTGAATCTGCAACCTGCTGCGATGACAACTCCAGCTGTTGTCCCTATGACTATCCTGTCTGCGACCTTAATGCCGGAACATGCAGAGTGAGCAAAGGTAATCCCTTTGGAGTAAAAGCATTGAGAAGAACTCCTGCAATCAAAACTCCCCCCCAGCATTTCTTAGCTTGA 1404 0.4623 MALSRRSCLSFFFLLFPVLRIGFALDMSIIDYDASHGQQVPNESRTETQMRAMYEAWLVRHGKAYNALGEKERRFEIFKDNLRFIDEHNKVEGRTFKLGLNKFADLTNEEYRDVFLGTKMNRTRALLSGSRKSGRYAVRVGDQLPESVDWREKGAVVPVKDQDQCGSCWAFSTVGAVEGINQIVTGDLISLSEQELIDCDKSYNQGCNGGLMDYAFEFIIKNGGIDTEDDYSYKARDGVCDPTRKNAHVVTIDGYEDVPENNEKALKKAVANQPVSVAIEAGGRAFQLYQSGVFTGTCGTELDHGVVVVGYGTKIGKDYWIVRNSWGPNWGENGYIKMERNVVSTTGKCGIAMEASYPVKKGQNPPKPGPSPPSPVKPPSVCDAYYSCPSGSTCCCVYPYGDFCLGWGCCPLESATCCDDNSSCCPYDYPVCDLNAGTCRVSKGNPFGVKALRRTPAIKTPPQHFLA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01802 467 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 162 173 IPR000169 -
Pte3g01802 467 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 43 358 IPR013128 GO:0008234
Pte3g01802 467 SUPERFAMILY Granulin repeat 379 413 - -
Pte3g01802 467 Pfam Cathepsin propeptide inhibitor domain (I29) 54 111 IPR013201 -
Pte3g01802 467 SMART Inhibitor_I29_2 54 111 IPR013201 -
Pte3g01802 467 CDD Peptidase_C1A 145 358 IPR039417 -
Pte3g01802 467 SUPERFAMILY Cysteine proteinases 46 359 IPR038765 -
Pte3g01802 467 PRINTS Papain cysteine protease (C1) family signature 304 314 IPR000668 GO:0006508|GO:0008234
Pte3g01802 467 PRINTS Papain cysteine protease (C1) family signature 162 177 IPR000668 GO:0006508|GO:0008234
Pte3g01802 467 PRINTS Papain cysteine protease (C1) family signature 319 325 IPR000668 GO:0006508|GO:0008234
Pte3g01802 467 FunFam Cysteine protease 1 28 361 - -
Pte3g01802 467 Pfam Granulin 393 439 IPR000118 -
Pte3g01802 467 Gene3D Cysteine proteinases 26 361 - -
Pte3g01802 467 SMART pept_c1 144 359 IPR000668 GO:0006508|GO:0008234
Pte3g01802 467 SMART GRAN_2 382 439 IPR000118 -
Pte3g01802 467 FunFam Cysteine protease 1 379 442 - -
Pte3g01802 467 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 302 312 IPR025660 -
Pte3g01802 467 Pfam Papain family cysteine protease 144 359 IPR000668 GO:0006508|GO:0008234
Pte3g01802 467 Gene3D Granulin 379 442 IPR037277 -
Pte3g01802 467 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 319 338 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01802 Pte-Chr3 27434244 27437095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01802 K25900 - qsa:O6P43_011751 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01802 3 27434244 27437095 Pte3g01303 3 11163545 11166333 RCT
Pte3g01802 3 27434244 27437095 Pte2g00371 2 2866859 2869410 RCT
Pte3g01802 3 27434244 27437095 Pte3g01802 3 27434244 27437095 RCT