Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00371 ATGGCCTCTTCTCGCAGGTTAGCTTTCCCTTCTTTTCTCTTTTTGTTTTCAATTCTAACAATTGGGTTTGCACTGGACATGTCCATCATTGACTATGATGCCTCGCATGGTCAACAAGTCTCCCACGAGTCTAGGACTGAGACACAGATAAGGGCAATGTATGAGGCTTGGTTAGCCAGGCATGGTAAGGTGTACAATGCATTGGGAGAGAAAGACAGGCGGTTTGAGATTTTCAAGGATAACCTTAAGTTCATTGACGAGCATAACAAGGTGGAGGGTCATACTTACAAGTTGGGGTTGAACAAGTTTGCTGATTTGACTAATGAGGAGTACAGAGCTACGTTTCTGGGTGCCAGAGTAAATAGAACCAGAGTTTTGCTTTCTGGGTCTAGAAAGAGCGATCGTTATACTCTTAGAGCCGGTGACGTATTGCCCGAATCTGTGGATTGGAGAGAGAAGGGTGCTGTGGTACCTGTTAAGGATCAAAGGCAATGTGGGAGTTGCTGGGCATTCTCAACGGTTGGTGCTGTAGAAGGGATTAATCAAATTGTAACCGGTGATCTGATCTCCTTGTCGGAGCAAGAACTGATTGACTGTGACAAATCATACAACCAGGGTTGCAATGGAGGTCTCATGGACTATGCCTTTGAATTTATCATAAAAAATGGAGGGATTGACACTGAAGACGACTACTCCTACAAAGCACGGGATGGTGTTTGTGATACAACTAGGAAAAATGCTCACGTAGTCACCATTGATGGATATGAAGATGTTCCTGAAAACAATGAGAAAGCCTTGAAGAAAGCAGTGGCAAACCAACCAGTTAGTGTCGCCATTGAAGCCGGTGGCAGAGCTTTCCAACTGTATAAATCAGGTGTTTTCACTGGCATGTGTGGAACTGAGCTTGACCATGGTGTGTTGGTGGTTGGATATGGAACTGAGGATGGTAAAGATTTCTGGATTGTGAGGAACTCGTGGGGTTCCAACTGGGGAGAGAATGGCTACATCAAGATGGAGCGAAATGTGGCTACCACTGCAACTGGAACATGCGGGATAGCAATGGAGGGTTCGTATCCTATCAAGAAGGGTCAGAATCCCCCTAAACCTGGTCCTTCCCCTCCATCACCTGCAAAACCTCCTTCTGTCTGTGATGAATATTACACTTGCCCCTCTGGAAGCACTTGCTGCTGTATCCATCGATATGGGGACTTTTGCTCTGGATGGGGATGTTGTCCTCTTGAGTCTGCAACCTGCTGCGATGACAACTCCAGTTGCTGTCCCCAAGAGTATCCCGTCTGCGATCTTGATGACGGAACATGCAGAGTGAGCAAGGGCAACCCTTTTGGAGTTAAAGCCTTGAGAAGAACTCCTGCAACCAAAACTCCCTCTCATCAATTTCTCAGCTTGGCAGTGGACAGTGCTTAA 1425 0.4639 MASSRRLAFPSFLFLFSILTIGFALDMSIIDYDASHGQQVSHESRTETQIRAMYEAWLARHGKVYNALGEKDRRFEIFKDNLKFIDEHNKVEGHTYKLGLNKFADLTNEEYRATFLGARVNRTRVLLSGSRKSDRYTLRAGDVLPESVDWREKGAVVPVKDQRQCGSCWAFSTVGAVEGINQIVTGDLISLSEQELIDCDKSYNQGCNGGLMDYAFEFIIKNGGIDTEDDYSYKARDGVCDTTRKNAHVVTIDGYEDVPENNEKALKKAVANQPVSVAIEAGGRAFQLYKSGVFTGMCGTELDHGVLVVGYGTEDGKDFWIVRNSWGSNWGENGYIKMERNVATTATGTCGIAMEGSYPIKKGQNPPKPGPSPPSPAKPPSVCDEYYTCPSGSTCCCIHRYGDFCSGWGCCPLESATCCDDNSSCCPQEYPVCDLDDGTCRVSKGNPFGVKALRRTPATKTPSHQFLSLAVDSA* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00371 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 162 173 IPR000169 -
Pte2g00371 474 SMART pept_c1 144 360 IPR000668 GO:0006508|GO:0008234
Pte2g00371 474 SMART GRAN_2 383 440 IPR000118 -
Pte2g00371 474 Gene3D Cysteine proteinases 26 362 - -
Pte2g00371 474 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 42 358 IPR013128 GO:0008234
Pte2g00371 474 FunFam Cysteine protease 1 380 443 - -
Pte2g00371 474 SUPERFAMILY Cysteine proteinases 46 360 IPR038765 -
Pte2g00371 474 Pfam Granulin 394 440 IPR000118 -
Pte2g00371 474 Pfam Cathepsin propeptide inhibitor domain (I29) 54 111 IPR013201 -
Pte2g00371 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 302 312 IPR025660 -
Pte2g00371 474 FunFam Cysteine protease 1 28 362 - -
Pte2g00371 474 Gene3D Granulin 381 443 IPR037277 -
Pte2g00371 474 SUPERFAMILY Granulin repeat 380 414 - -
Pte2g00371 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 319 338 IPR025661 -
Pte2g00371 474 CDD Peptidase_C1A 145 359 IPR039417 -
Pte2g00371 474 PRINTS Papain cysteine protease (C1) family signature 162 177 IPR000668 GO:0006508|GO:0008234
Pte2g00371 474 PRINTS Papain cysteine protease (C1) family signature 304 314 IPR000668 GO:0006508|GO:0008234
Pte2g00371 474 PRINTS Papain cysteine protease (C1) family signature 319 325 IPR000668 GO:0006508|GO:0008234
Pte2g00371 474 Pfam Papain family cysteine protease 144 360 IPR000668 GO:0006508|GO:0008234
Pte2g00371 474 SMART Inhibitor_I29_2 54 111 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00371 Pte-Chr2 2866859 2869410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00371 K25900 - qsa:O6P43_011751 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01303 3 11163545 11166333 Pte2g00371 2 2866859 2869410 RCT
Pte3g01802 3 27434244 27437095 Pte2g00371 2 2866859 2869410 RCT
Pte2g00371 2 2866859 2869410 Pte3g01303 3 11163545 11166333 RCT
Pte2g00371 2 2866859 2869410 Pte2g00371 2 2866859 2869410 RCT