Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01303 ATGGGCACTTCCCATTCACAATCATCGGCTACGCTCTTGATTCTTCTTATGGCCTTGACGGCCTTCTCATCAGCTTCGGACATGTCTATCATCTCCTACGACCAAAGCCACGGTGCTCAGCAGTCAAACTGGAGGACTGAACAAGAGGTGATGTCCATGTACGAGGAGTGGCTTCTTAAACAGGGTAAAGTCTATAACGCTCTGGGCGAGAAAGATAGGAGGTTCGATATCTTCAAGGACAATCTCAAGTTCATCGACGAGCACAACGCCAACCAAAACCGAACGTACACCCTCGGTTTAACCCGATTTGCGGATCTTACCAACGAGGAGTACAGAGCCAGGTACCTTGGTACCAAGATCGATCCAAAGAGGAGGCTACCCAAGACCAGGAGCAATCGATACGCGCCACGTGTCGGCGAGGAATTGCCCGAATCCGTTGACTGGAGAGAGAAAGGTGCCGTCGCCGAAGTCAAAGACCAAGGAAGCTGCGGGAGCTGCTGGGCATTCTCCACAATTGCTGCTGTTGAAGGTATAAACAAGATAGTGACGGGGGATCTCATCTCACTATCAGAGCAAGAGCTTGTGGATTGTGATACATCATACAATCAAGGATGCAATGGTGGACTCATGGATTATGCCTTCGAGTTCATTATCAAGAATGGAGGCATTGACACTGAGGAAGATTATCCTTACGAAGCTTATGACGGAACATGTGATCAATACCGGAAAAACGCAAAAGTTGTTACAATAGATAGCTACGAAGATGTTCCACCAAATGACGAGAAAGCGTTGTTAAAGGCAATAGCTAATCAACCAGTGAGTGTGGCTGTTGAAGGAGGCGGTAGGGCTTTCCAACTTTATCAATCAGGTGTGTTTAATGGAAGATGTGGGACGCAATTGGATCATGGTGTTGCAGCTGTTGGTTATGGTTCAGAAAATGGTCTTGATTACTGGATTGTGAAAAATTCGTGGGGTAAGAATTGGGGAGAGAAAGGTTATATCAGGCTGCAGCGTAATTTGGCAGGAACTTCAACCGGTAAATGTGGAATTGCCATGGAGGCCTCGTATCCTATCAAGAAAGGCCAAAATCCCCCCAATCCGGGACCTTCCCCTCCATCGCCTATAAAACCACCAAGTGTTTGTGACGACTACTACACCTGCCCTGCAAGCACTACTTGCTGCTGTGTTTATGATTATGGAGACCTTTGCTTTGCATGGGGATGCTGCCCTCTCGAGGCTGCCTCCTGCTGTGATGACCACGAGAGCTGCTGCCCACATGAATATCCCATCTGCAATGTTCAAGCAGGGACCTGTCTGACGAGCAAGAACAACCCATTTGGAGTGAAGGCAATGAAGCGAATTCAAGCTACACCGTATCATAGTCATGGAAGAAATGGCCAGAGCAGTAGTTCTTGA 1416 0.4788 MGTSHSQSSATLLILLMALTAFSSASDMSIISYDQSHGAQQSNWRTEQEVMSMYEEWLLKQGKVYNALGEKDRRFDIFKDNLKFIDEHNANQNRTYTLGLTRFADLTNEEYRARYLGTKIDPKRRLPKTRSNRYAPRVGEELPESVDWREKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYEAYDGTCDQYRKNAKVVTIDSYEDVPPNDEKALLKAIANQPVSVAVEGGGRAFQLYQSGVFNGRCGTQLDHGVAAVGYGSENGLDYWIVKNSWGKNWGEKGYIRLQRNLAGTSTGKCGIAMEASYPIKKGQNPPNPGPSPPSPIKPPSVCDDYYTCPASTTCCCVYDYGDLCFAWGCCPLEAASCCDDHESCCPHEYPICNVQAGTCLTSKNNPFGVKAMKRIQATPYHSHGRNGQSSSS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01303 471 SUPERFAMILY Cysteine proteinases 45 358 IPR038765 -
Pte3g01303 471 Pfam Granulin 392 439 IPR000118 -
Pte3g01303 471 PRINTS Papain cysteine protease (C1) family signature 160 175 IPR000668 GO:0006508|GO:0008234
Pte3g01303 471 PRINTS Papain cysteine protease (C1) family signature 302 312 IPR000668 GO:0006508|GO:0008234
Pte3g01303 471 PRINTS Papain cysteine protease (C1) family signature 317 323 IPR000668 GO:0006508|GO:0008234
Pte3g01303 471 SMART Inhibitor_I29_2 54 111 IPR013201 -
Pte3g01303 471 FunFam Cysteine protease 1 29 360 - -
Pte3g01303 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 300 310 IPR025660 -
Pte3g01303 471 CDD Peptidase_C1A 143 357 IPR039417 -
Pte3g01303 471 SMART pept_c1 142 358 IPR000668 GO:0006508|GO:0008234
Pte3g01303 471 Gene3D Cysteine proteinases 35 360 - -
Pte3g01303 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 317 336 IPR025661 -
Pte3g01303 471 Gene3D Granulin 379 441 IPR037277 -
Pte3g01303 471 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 42 356 IPR013128 GO:0008234
Pte3g01303 471 Pfam Papain family cysteine protease 142 358 IPR000668 GO:0006508|GO:0008234
Pte3g01303 471 Pfam Cathepsin propeptide inhibitor domain (I29) 54 111 IPR013201 -
Pte3g01303 471 SUPERFAMILY Granulin repeat 378 412 - -
Pte3g01303 471 FunFam Cysteine protease 1 378 441 - -
Pte3g01303 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 160 171 IPR000169 -
Pte3g01303 471 SMART GRAN_2 381 438 IPR000118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01303 Pte-Chr3 11163545 11166333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01303 K25900 - qsa:O6P43_018958 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01303 3 11163545 11166333 Pte2g00371 2 2866859 2869410 RCT
Pte3g01303 3 11163545 11166333 Pte3g01303 3 11163545 11166333 RCT
Pte3g01802 3 27434244 27437095 Pte3g01303 3 11163545 11166333 RCT
Pte2g00371 2 2866859 2869410 Pte3g01303 3 11163545 11166333 RCT