Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01637 ATGGAGGAGGCAGCCCAGCAACCAAGGTTTGTGATGCCAGAAACAGTGCAGGGGGTAAGCTATGACATAGCAGGACAGATTAGACTGATTTGGGATGTGATCAAAGCGCCTCTGATAGTGCCTCTGCTGAGGCTTGGTGTCTACATTTGCTTGGCAATGTCACTCATGCTTTTCATTGAAAGGCTTTACATGGGTATCGTCATCATCCTCGTCAAGCTTTTCTGGAAAAAACCTGAGAAGCGTTACAACTATGAAGCCCTTCAAGACGACGTGGAACTGGGTAGCACGAATTTCCCGGTCGTGCTCGTGCAAATCCCCATGTTTAACGAAAAAGAGGTTTACAAGGTGTCAATTGGAGCTGCTTGTGGACTTTCATGGCCAGCGGATCGGCTCGTGATCCAAGTCCTCGATGATTCGACTGACCCTGCTATCAAGCAAATGGTGGAGGACGAATGCCTGAGATGGGCTAATAAAGGCATTAACATAACATACCAAATCAGAGAAAACAGGGTTGGTTACAAAGCAGGTGCTCTAAAAGAAGGTCTCAAGCGTAGCTACGTCAAGCATTGTGAGTATGTGGCCATTTTCGATGCTGATTTCAGACCAGAGCCTGATTTTCTAAGGCGTGCCATTCCATTCTTGATTGATAACCCTGACATTGCTTTGGTTCAAGCTCGCTGGAGATTTGTGAATGCGAATGAGTGTCTGTTGACAAGGATGCAGGAGATGTCACTCGATTACCATTTCACAGTGGAGCAAGAAGTTGGGTCAGCCACACATGCCTTCTTTGGTTTTAATGGCACAGCAGGTGTTTGGAGAATTGCTGCTATTAATGAAGCTGGAGGATGGAAGGACAGGACAACAGTGGAGGACATGGACCTTGCTGTTCGGGCTAGTCTTAGAGGATGGAAATTTTTGTACCTTGGAGACCTGCAGGTGAAAAGTGAACTTCCAAGTACTTTCAAGGCCTTCCGTTTCCAGCAGCACCGATGGTCCTGTGGTCCTGCTAATTTGTTCAGAAAAATGGTGATGGAGATAGTTAGGAACAAAAAAGTATATTTCTGGAAGAAAGTTTATGTCATATACAGTTTCTTCTTCGTTCGCAAGATCATAGCTCACTGGGTCACCTTCAGTTTCTACTGTGTTGTACTCCCTCTGACCATTTTGGTGCCTGAGGTTCATGTTCCAATTTGGGGAGCTGTGTATATACCTTCCATCATCACCATTCTCAACTCAGTAGGAACTCCAAGATCAATCCACCTATTATTCTACTGGATTCTTTTTGAGAACGTGATGTCCTTGCACCGAACCAAGGCAACCTTCATTGGTTTGTTTGAAGCTGGTAGGGTCAACGAATGGGTGGTCACTGAAAAATTAGGGGATTCTGCAACCAAGAAGAAAACAGCAGATGTCAAGAACAACGCAAATAACAAAAGCCCTAGAAGACCTCTATTCAAATTTGGGGACAGGATCCAGAAATTGGAGCTGGGATTTGGATTGTACCTCTTCATTTGTGGATGTTATGATTTCGTGCATGGAAAGAACAACTACTTCATCTATCTATTTCTCCAGACAATCACCTTTGTCATAGCCGGATTTGGCTATATTGGCACTATCATCTAG 1623 0.4467 MEEAAQQPRFVMPETVQGVSYDIAGQIRLIWDVIKAPLIVPLLRLGVYICLAMSLMLFIERLYMGIVIILVKLFWKKPEKRYNYEALQDDVELGSTNFPVVLVQIPMFNEKEVYKVSIGAACGLSWPADRLVIQVLDDSTDPAIKQMVEDECLRWANKGINITYQIRENRVGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAIPFLIDNPDIALVQARWRFVNANECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIVRNKKVYFWKKVYVIYSFFFVRKIIAHWVTFSFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLFEAGRVNEWVVTEKLGDSATKKKTADVKNNANNKSPRRPLFKFGDRIQKLELGFGLYLFICGCYDFVHGKNNYFIYLFLQTITFVIAGFGYIGTII* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01637 540 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 19 538 - -
Pte1g01637 540 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 318 IPR029044 -
Pte1g01637 540 Pfam Glycosyl transferase family group 2 192 401 IPR001173 -
Pte1g01637 540 FunFam Glucomannan 4-beta-mannosyltransferase 9 90 318 - -
Pte1g01637 540 CDD CESA_CaSu_A2 99 335 - -
Pte1g01637 540 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 379 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01637 Pte-Chr1 37973397 37978129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01637 7 540 Miscellaneous Gene Families AT5G22740 82.056 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01637 K13680 - qsa:O6P43_000419 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01637 1 37973397 37978129 Pte1g01637 1 37973397 37978129 RCT
Pte18g01561 18 27166181 27170819 Pte1g01637 1 37973397 37978129 RCT
Pte15g01054 15 7780388 7785680 Pte1g01637 1 37973397 37978129 RCT
Pte15g00605 15 4453345 4458131 Pte1g01637 1 37973397 37978129 RCT