Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01054 ATGGAGGAAGTAGCAGCTCAACAACCGAAGTTTCTGATGCCAGAAACAGTGCAGGGGGTTGGCTATGACGTAGCAAGCGAGATTCAAATGATATGGGACGTGATGAAAGCACCACTCATAGTGCCTCTGCTAACGCTAGGTGTGTACATTTGCTTGGCAATGTCACTCATGCTCTTCATGGAAAGGCTTTACATGGGTGTGGTCATCATCCTCGTCAAGCTTTTCTGGAAAAAACCTGAAAAGCGTTACAAGTATGAACTCATTGAAGACGACGAGGAATTAGGCAGCTCCAATTTCCCTGCAGTTCTCATTCAAATCCCAATGTTTAACGAAAGAGAGGTTTACAAGGTTTCAATTGGTGCTGCTTGTGGACTTTCATGGCCAGCAGATCGTCTCGTGATCCAAGTCCTCGATGATTCAACTGACTCTGCTATCAAGCAAATGGTGGAGCAAGAATGCCAGAGATGGGCAAGCAAAGGCATCAACATCACTTACCAAATTAGAGAGAACAGGGTAGGTTACAAAGCAGGTGCTCTTAAAGAAGGTTTAAAACGCAACTATGTCAAACACTGTGAGTACGTGGCCATTTTTGATGCCGATTTTAGACCTGAGCCTGATTTTCTTAGACGTTCAATTCCATTCTTGGTTCACAACCCCGAGATTGCGTTGGTTCAAGCTCGCTGGAGATTTGTGAATGCGGATGAGTGTTTGTTGACGAGGATGCAAGAGATGTCACTGGATTACCATTTCACCGTGGAGCAGGAAGTTGGTTCAGCCACCCACGCCTTTTTTGGATTCAATGGCACTGCTGGCGTGTGGAGGATTGCTGCTATCAATGAAGCTGGAGGGTGGAAGGACAGGACAACAGTGGAGGACATGGATCTTGCTGTTCGTGCAAGTCTTAGGGGATGGAAATTTTTGTACCTCGGAGACCTGCAGGTGAAAAGTGAACTTCCTAGTACTTTCAAGGCCTTCCGTTTCCAGCAGCACAGATGGTCGTGTGGCCCTGCTAATCTATTCAGGAAAATGGTGATGGAGATCGTAAGAAATAAGAAAGTGTATTTCTGGAAGAAAGTTTATGTCATATACAGTTTCTTCTTTGTTCGGAAGATCATAGCTCACATGGTCACCTTCATATTCTACTGTGTTGTACTTCCTCTGACCATTTTGGTACCTGAGGTTACTGTTCCAATTTGGGGAGCTGTTTATATACCTTCTATCATCACCATCCTCAATTCAGTTGGAACTCCAAGGTCTATCCACTTACTGTTCTACTGGATTCTTTTTGAGAATGTGATGTCTTTGCATCGGACAAAGGCCACTTTCATTGGTTTGCTAGAAGCTGGTAGAGCCAATGAATGGGTTGTTACTGAAAAGTTAGGGGATTCTGCCCTCAAGAACAAAGCAGGAGATGCCAAGAACAAGACTCATACCAAAGGCCCTAAAAGACCTCTATTCAAATTTAGTGAAAGAATACACAAATTGGAGCTTGGATTTGGAGTGTTCCTCTTCTTTTGTGGATGCTATGATTTTGTGCATGGCAAGAACAACTACTTCATCTACCTCTTCCTGCAGACTATAACCTTCCTCATTGCAGGATTTGGCTATGTTGGCACCATTATATGA 1626 0.4403 MEEVAAQQPKFLMPETVQGVGYDVASEIQMIWDVMKAPLIVPLLTLGVYICLAMSLMLFMERLYMGVVIILVKLFWKKPEKRYKYELIEDDEELGSSNFPAVLIQIPMFNEREVYKVSIGAACGLSWPADRLVIQVLDDSTDSAIKQMVEQECQRWASKGINITYQIRENRVGYKAGALKEGLKRNYVKHCEYVAIFDADFRPEPDFLRRSIPFLVHNPEIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIVRNKKVYFWKKVYVIYSFFFVRKIIAHMVTFIFYCVVLPLTILVPEVTVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSALKNKAGDAKNKTHTKGPKRPLFKFSERIHKLELGFGVFLFFCGCYDFVHGKNNYFIYLFLQTITFLIAGFGYVGTII* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01054 541 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 381 IPR029044 -
Pte15g01054 541 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 25 539 - -
Pte15g01054 541 Pfam Glycosyl transferase family group 2 193 391 IPR001173 -
Pte15g01054 541 FunFam Glucomannan 4-beta-mannosyltransferase 9 91 319 - -
Pte15g01054 541 CDD CESA_CaSu_A2 100 336 - -
Pte15g01054 541 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 319 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01054 Pte-Chr15 7780388 7785680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01054 8 541 Miscellaneous Gene Families AT5G22740 82.276 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01054 K13680 - qsa:O6P43_000419 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01054 15 7780388 7785680 Pte1g01637 1 37973397 37978129 RCT
Pte15g01054 15 7780388 7785680 Pte15g01054 15 7780388 7785680 RCT