Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00295 ATGATGGATTCTGTAAAACGCTCAGCAGTGGCACCAAGAAAAAGTAAGCTGGCTCGTACATTTGCTAAAGTTCTTCAACTCCGGGCACTGACTGGGATTGCATCATCTAATGGACATAAGAATTGCAAGTCTGAGGGAAATGCGAAGGATGAGGGTGACATTTTGAAAGCTACAGTTAACTGGCCTCATTCTTATGATGGCAAAAGTGAAGAACTTCAAGACAGATTGGCCATGGAAGCTCTTCTGGCAAAACTTTTTGCTAGTCTTTCAATCATAAAGGCCGCATATGCTCAATTGCAGTATGCTCAGTCACCTTATGATGCTGATGGAATTCAAACTGCAGATCACTTGATAGTGTCTGAATTGAAGATTTTGTCTGAAATAAAGCAATGTTATTTGAAAAGGCAATTTGATCCTTCACCTGAAACGACAATGGTTTTGGCTGAAGTAAAAGAGCAGAAGTGTATCTTGAAAACCTACGATATTATGGGGAAAAAGTTGGAATTCCAGGAGAGGCTCAAGGAGTCTGAAATTATATTTCTTAAAGAGAAGCTAGAGGAAGCTAAAAGACAAAACCGGCTAATTGAGAAGAGATTAAACCAAAGCGGGCAATTAGCTGCTTTCAATAATCTTAATGTTTCTGGGGTAAGCCCTAGCCATTTTGTCACCCTTCTTCGGCAGGCGGTCAAGTCCATTCGAAACATTGTGAGGTTTATGGTAGATGAAATGAGATCGATCGGTTGGGATATTGATGCTGCAGTCGATGCAATTGAACACGATGTCGTATATTACAAAGATGACGACAAGTGTTTTGCATTTGAATGCTTTATATGCAGGGTGATGTTTGACTTCTTCGACATTCCAAATTATTCTCTTCCTAATGAGTTTCTGCCAGACAAAGGGAACCTCCAGCAGCATTTTTTTGATAGATTTATAGAACTCAAATCTATGAAAGCAATGTGGTTCCTTGCTCAGAATCCCAGATCACCATTTGCAAAGTTTTGTCGTGTGAAGTACTTGCAAATTGTTCACCCGAAGATGGAATCATCATTTTATGGCAACTTGACTCAGAGAAACCTTGTGAGTGCAGGTGATTTTCCGGACACTACCTTCTTTACGATGTTTGCTGACATGGCCAAGAGAGTATGGCTCCTACACTGCTTAGCCTTCTCTTTCAACCCGGAAGCTTCAATCTTTCAAGTTAGAAGGGGCTGCAGATTCTCTGAAGTCTACATGGAAAGCATAAACGATGATGAAATGCTTTATTCTTCTGGCGAAACATCAGAAGGTGACATACAAGTGGCTTACACAGTTGTCCCTGGATTCATCATTGGTAAAACTGTCATACAGTCCCAAGTCTACCTTTCACGATTCAACGCCAAGTCGAAAAAGACCAACACCAAAAGGCAAAGGTCCCCACATGATGACCACTGTACTCATTGGGCGGTGGTAGAGTCTCTTCCTGAATATAGATGTGATTTGTGA 1485 0.4108 MMDSVKRSAVAPRKSKLARTFAKVLQLRALTGIASSNGHKNCKSEGNAKDEGDILKATVNWPHSYDGKSEELQDRLAMEALLAKLFASLSIIKAAYAQLQYAQSPYDADGIQTADHLIVSELKILSEIKQCYLKRQFDPSPETTMVLAEVKEQKCILKTYDIMGKKLEFQERLKESEIIFLKEKLEEAKRQNRLIEKRLNQSGQLAAFNNLNVSGVSPSHFVTLLRQAVKSIRNIVRFMVDEMRSIGWDIDAAVDAIEHDVVYYKDDDKCFAFECFICRVMFDFFDIPNYSLPNEFLPDKGNLQQHFFDRFIELKSMKAMWFLAQNPRSPFAKFCRVKYLQIVHPKMESSFYGNLTQRNLVSAGDFPDTTFFTMFADMAKRVWLLHCLAFSFNPEASIFQVRRGCRFSEVYMESINDDEMLYSSGETSEGDIQVAYTVVPGFIIGKTVIQSQVYLSRFNAKSKKTNTKRQRSPHDDHCTHWAVVESLPEYRCDL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00295 494 Pfam Plant protein of unknown function (DUF641) 75 198 IPR006943 -
Pte17g00295 494 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 13 456 IPR040225 GO:0009639|GO:0009959
Pte17g00295 494 Coils Coil 171 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00295 Pte-Chr17 4006451 4011225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00295 - - qsa:O6P43_029203 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00295 17 4006451 4011225 Pte15g01628 15 14275469 14279331 RCT
Pte1g01220 1 33305993 33310665 Pte17g00295 17 4006451 4011225 RCT
Pte17g00295 17 4006451 4011225 Pte17g00295 17 4006451 4011225 RCT