Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01628 ATGGATTCTGTTAAACCTTCAGCAGTGATGCCGAGTAAAAGCAAGTTAGGTCGAACATTTGCCAAAGTTCTGCACTTACGGTCATTATCTGGGATTCCATCAGTAAATGGATATAAGATAGGTAAGCCTGAGGGGAAGGTGAAGGACGATGGAGACACCATTAAGACTAAAGTTAACTGGCCACATTCTTACGAGGAAAAAAGTGAAGAACTTCAAGATAGATTGGCGATGGAAGCTCTTCTTGCGAAACTTTTTGCTAGCATTTCAACTATAAAAGCTGCATATGCTGAGTTACAGCATGCTCAGTCACCTTATGATGCTGATGGAATTCAAGCTGCAGATCAATTCATAGTATCTGAGTTAAGGAATTTGTCTGAGACAAAGCAGTGTTATTTAAAAAAGCAATTAGATCCTTCACCAGAGACAACAATGGTTCTTGCTGAAATGAAAGAGCAGCATAGTATCTTGAAAACTTTTGAGATTATGGGGAAGAAACTTGAATTTCAGGTGAGGCTCAAAGATTCAGAAATTACATTTCTCAATGAGAAACTGGAGGAAGCCAAAAGACAGAACCGGTCAATTGAAAAGAGATTAAACCAAAGCGGGCAATTATCTGTATTCGATAACCTTAACGCTTCAAGCTTAACCCCTAGCCATTTCATCACAGTTCTTAGGCATGCAGTCAAATCCATTAGAAGGTTTGTGACGTTCATGGTGGATGAAATGAGATCAGTTGGTTGGGATATTGATGCTGCAGTCAATGCAATTGAACCGAATGTCTTTTACTGTAGAAAGGATGACAGATGTTTTGCGTTTGAATCCTTTATTTGCAGGGTACTATTTAACTCTTTCCACAATCCAAATTTTTCTCTGCCTAATGAGTCTCTTCCAGCCAATAGGAACCAGCAGCAGCAACTGTTTTTTGCTAGATTTACAGAACTCAAATCCATGAAAGCAATGGATTTCCTCTGTCAAAATCCCAGGTCGACATTTGCAAAGTTTTGTCGTATGAAGTACTTGCGGATGGTTCACCCCAAGATGGAGTCTTCGTTCTTTGGTAACTTGACTCAAAGGAACCTCGTGAATGCTGGTCAGTTTCCCCACACTACATGCTTCACTATATTTGTCGAAATGGTCAAGAGGGTCTGGCTTCTACATTGCTTAGCCTTCTCTTTTGAGCCTAAAGCTTCAATCTTTCAGCTGAGGAGGGGCTGTAGGTTCTCTGAAGTCTACATGGAGAGTGCAAACGATGATGACATGCTCTATCCAAATGATGTTGAAGCATCAGAATTAGACCTACAAGTGGCTTACACAGTTGTCCCGGGGTTCATAATTGGTAAAACCATTATTCAGTCCCAAGTCTATCTTTCACGGTCTCAAACCAATGTGAATAAAGACCAGTACTAG 1407 0.4044 MDSVKPSAVMPSKSKLGRTFAKVLHLRSLSGIPSVNGYKIGKPEGKVKDDGDTIKTKVNWPHSYEEKSEELQDRLAMEALLAKLFASISTIKAAYAELQHAQSPYDADGIQAADQFIVSELRNLSETKQCYLKKQLDPSPETTMVLAEMKEQHSILKTFEIMGKKLEFQVRLKDSEITFLNEKLEEAKRQNRSIEKRLNQSGQLSVFDNLNASSLTPSHFITVLRHAVKSIRRFVTFMVDEMRSVGWDIDAAVNAIEPNVFYCRKDDRCFAFESFICRVLFNSFHNPNFSLPNESLPANRNQQQQLFFARFTELKSMKAMDFLCQNPRSTFAKFCRMKYLRMVHPKMESSFFGNLTQRNLVNAGQFPHTTCFTIFVEMVKRVWLLHCLAFSFEPKASIFQLRRGCRFSEVYMESANDDDMLYPNDVEASELDLQVAYTVVPGFIIGKTIIQSQVYLSRSQTNVNKDQY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01628 468 Pfam Plant protein of unknown function (DUF641) 74 197 IPR006943 -
Pte15g01628 468 Coils Coil 170 204 - -
Pte15g01628 468 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 12 457 IPR040225 GO:0009639|GO:0009959
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01628 Pte-Chr15 14275469 14279331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01628 - - qsa:O6P43_029203 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00295 17 4006451 4011225 Pte15g01628 15 14275469 14279331 RCT
Pte15g01628 15 14275469 14279331 Pte15g01628 15 14275469 14279331 RCT