Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01220 ATGGATTCTGTGAAACGCTCAGCAGTGGCTCCAAGTAAAAGTAAGCTGGCTCGTACGGTTGCCAAAGTTCTTCACCTCAGTGCAATTGCTGGGATTGCATCATCTAATAGACATAAGAATTGTAAGTCTGGGGGAAATCTGAAGGATGAGGGTGAAATAATGAAGACGACAGTTGATTGGCCTCATTCTTATGATGGCAAAAGTGAAGAACTTCAAGATAGATTGGCCGTGGAAGCTCTTCTGGCAAAACTTTTTGCCAGTCTTTCAACCATAAAGGCTGCATATGCTCAATTGCAGTATGCTCAGTCACCTTATGATGCTGATGGAATTCAAACTGCTGATCACTTGATCGTGTCTGAATTGAGGATTTTGTCAGAAATAAAGCAATGTTATTTGAAAAAGCAATTTGATCCTTCACCTGAAACAACAATGGGTCTATCTGAAGTAAAAGAACAGAAGAGTATCTTGAAAACCTACGAGATTATGGGGAAAAAGTTGGAATTTCAGATGAGACTCAAGGATTCTGAAATTATATTTCTTAAGGAGAAACTGGAGGAAGCCAAAAGGCAGAACCGGCAACTTGAGAAGAGATTAAACCAAAGCAGCCAATTAGCTGCCTTTGATAATCTTAATGTGTCAAGCGTACGCCCTAGCCATTTTGTTACAGTTTTTCGGCAGGCAGTCAAATCCATTCGAAGCATTGTGAGGTTTATGGTGAATGAAATGAGATCAGTTGGTTGGGATATTGATGCTGTTGTCAATGCAATTGAACAGAATGTTGTTTATTACAAAGAAGATGACAGATGTTTTGCATTTGAATGCTTTATATGCAGGGCAATGTTTGACTCTTTCAACTATCCAAATTTTTCTCTTTCTAATGAGTTTCTGCCAGACAAAGGGAACCTGCAGCAGCAGTTTTTCGATAGATTTACAGAACTCAAATCCATGAAAGCAATGGCGTTCCTTGCTCAGAATCCGAGATCACCATTTGCCAAGTTTTGTCGTATGAAGTACTTGCAGATTGTTCACCCCAAGATGGAATCATCATTCTTTGGCAACTTGACTCAGAGAAACCTTGTCGATGCAGGTGACATTCCAGATACTACCTTTTTTACTATGTTTGCTGACATGGCGAAGAGGGTGTGGCTTTTGCACTGCTTAGGCTTCTCTTTCGATCCTGAAGCTTCAATCTTTCAAGTGAGGAGGGGCTGTAGATTTTCTGAAATTTACATGGAAAGCGTAAACGATGATGAAATTCTTTATTCAACTGGCGAAACATCAGAAGGTGATATACAAGTGGCTTACACAGTTGTCCCGGGATTCATTATTGGTAAAACTGTAATACAATCCCAAGTCTACCTTTCACGATTCGACCCCAAGTCTAAAAAGACCAATACCAAAAGGCAAAGGTAG 1413 0.4006 MDSVKRSAVAPSKSKLARTVAKVLHLSAIAGIASSNRHKNCKSGGNLKDEGEIMKTTVDWPHSYDGKSEELQDRLAVEALLAKLFASLSTIKAAYAQLQYAQSPYDADGIQTADHLIVSELRILSEIKQCYLKKQFDPSPETTMGLSEVKEQKSILKTYEIMGKKLEFQMRLKDSEIIFLKEKLEEAKRQNRQLEKRLNQSSQLAAFDNLNVSSVRPSHFVTVFRQAVKSIRSIVRFMVNEMRSVGWDIDAVVNAIEQNVVYYKEDDRCFAFECFICRAMFDSFNYPNFSLSNEFLPDKGNLQQQFFDRFTELKSMKAMAFLAQNPRSPFAKFCRMKYLQIVHPKMESSFFGNLTQRNLVDAGDIPDTTFFTMFADMAKRVWLLHCLGFSFDPEASIFQVRRGCRFSEIYMESVNDDEILYSTGETSEGDIQVAYTVVPGFIIGKTVIQSQVYLSRFDPKSKKTNTKRQR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01220 470 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 12 455 IPR040225 GO:0009639|GO:0009959
Pte1g01220 470 Coils Coil 170 204 - -
Pte1g01220 470 Pfam Plant protein of unknown function (DUF641) 74 197 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01220 Pte-Chr1 33305993 33310665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01220 - - qsa:O6P43_029203 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01220 1 33305993 33310665 Pte17g00295 17 4006451 4011225 RCT
Pte1g01220 1 33305993 33310665 Pte1g01220 1 33305993 33310665 RCT