Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00532 ATGGGAATGGCTACTTATAATTTGGACCCTGATGTTTCACGCTGGGGTCTTCATCAGCTTCTAGATGTTTGCACAATTTCAAACAGCGGTTCTCCCACTGCTATTACTGGTTATGATGTTGATGGAAGTCAAGTCGAGTATGTAAGAGAAGGTTACTGTGAGCAAACGACTGTAGAGAGTGATGAGGCTGTAGCACGAGCATACCAAGAGGAACTATCTCGACTGGATTCATTAGAAGGCTCTGAGCCATCTAACGTCGAAGACGAGCAATTGCGAGCATCCATTCTTGCGCAAGATTGGCACAGTTCTTCAAGAAGAAACTATGATTGTGGTAATAGTGATAGAGGTGATTCAGTTGGTATGAATGATGCCGACGATTTTTCCATGATCAGCAATGAAAATGGTATGATGAATCAAGTTGAAATTTTTGGTTCAACTTATGACGAAGGGGAAATACCTGTGTCTAGTGAAAACTTATTGGAGATATCAGATGAGTCTGTGCTTGACGGTGAAGTTGGTAGAAGACTTAATCAGATGGTTCCTGTGCCTCATGTTCCTAAAACAAATGAAAAGATACCTTCTGATGAAGAAGAGATATCAGATCATCAAAGGCTCCTAGACAGACTTCAGCTATATGATTTGGTTGAGCATAAAGTGCATGGAGATGGTAATTGTCAGTTTCGATCTTTGTCAGATCAACTTTATCGCACTCCTGATTATCACAAATTTGTACGAGAGCAAATTGTTTCACAGCTGAAGGCTCACCCAGAAACGTATGCTGGTTATGTTCCTATGCCTTATGATGATTATTTGAACAAAATGAGCAAGAGTGCTGAATGGGGTGATCATGTCACACTGCAGGCTGCCGCAGATTGGTTTGGTGTGAAAGTATTTGTGATTACATCTTTCAAAGACACATGCTACATTGAGATTCTCCCACAGATTCAGAAATCGACAAGAGTGATTTGTCTGAGCTTTTGGGCAGAGGTGCATTACAATTCAATCTATCCAGAAGGAGGTAAACTTCTACCCATGGACGTACTGAAGAATATACATCGACACGATGATTACAACTCTTCTTTAGTTTCTAAGGCTTTTTTAGTAGATGCGTCCAGAGTTGCTTTCTAA 1128 0.4069 MGMATYNLDPDVSRWGLHQLLDVCTISNSGSPTAITGYDVDGSQVEYVREGYCEQTTVESDEAVARAYQEELSRLDSLEGSEPSNVEDEQLRASILAQDWHSSSRRNYDCGNSDRGDSVGMNDADDFSMISNENGMMNQVEIFGSTYDEGEIPVSSENLLEISDESVLDGEVGRRLNQMVPVPHVPKTNEKIPSDEEEISDHQRLLDRLQLYDLVEHKVHGDGNCQFRSLSDQLYRTPDYHKFVREQIVSQLKAHPETYAGYVPMPYDDYLNKMSKSAEWGDHVTLQAAADWFGVKVFVITSFKDTCYIEILPQIQKSTRVICLSFWAEVHYNSIYPEGGKLLPMDVLKNIHRHDDYNSSLVSKAFLVDASRVAF* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00532 375 SUPERFAMILY Cysteine proteinases 201 337 IPR038765 -
Pte16g00532 375 FunFam OTU domain-containing protein 196 342 - -
Pte16g00532 375 ProSiteProfiles OTU domain profile. 214 338 IPR003323 -
Pte16g00532 375 PANTHER OTU DOMAIN CONTAINING PROTEIN 57 339 - -
Pte16g00532 375 Pfam OTU-like cysteine protease 221 307 IPR003323 -
Pte16g00532 375 CDD OTU_plant_OTU9-like 205 336 - -
Pte16g00532 375 Gene3D - 195 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00532 Pte-Chr16 9410124 9416703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00532 - - qsa:O6P43_005016 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01607 18 27515059 27519275 Pte16g00532 16 9410124 9416703 RCT
Pte16g00532 16 9410124 9416703 Pte16g00532 16 9410124 9416703 RCT
Pte16g00532 16 9410124 9416703 Pte9g00573 9 8402785 8412850 RCT