Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00573 ATGTCTCACCCCATCGAGCGCTCAGCCACCCGCATCGACACTACTGACGCCACGTCCCCCAACCCACCGACCACAACCTCTGCGTCGCCGTCTTCTTCTTCTGCTACTGCCGCCTCCGCCACAGGTTCACCCCCAATGAAGAAAGCTAAGTCGCAGGCTGCGGCCCCATGTGCACTTGACATTAAGAACGGCCTTCACCATCACACTCAACATCACCAACAACAAGACTTCAACCCCTCTGATGATGTTGTCTATGACCATTCCTCTATGTCCATTGATGAAGATCTCAAGCCTGATGATCCAGCTGCCCTTTCCAGTTCTCGTGGTCTTGTCGCTGCCAATTTATCTAGGAAGAAAGCTCAACCTCCACAACCTGCTAAGAAGCTTGTCATCAAGCTTGTTAAAGCTAAACCAACAATACCCTCCAATTTTGAGGAGGACACGTGGGCTAAGTTGAAGTCAGCTATATGTGCTATATTCTTGAAGCGGCCTGATTCTTGTGACTTAGAGCAGCTTTATCAGGCTGTTAATGACCTCTGCCTGCACAAGATGGGGGGAAACCTTTATCAACGTATAGAAAAGGAGTGTGAAGCACATATATCTGCAGCAATCCAGTCTTTGATCGGCCAAAGTCCAGACTTGGTGGTTTTCCTATCCCTTGTTGAGCGATGCTGGCAGGATCTTTGTGACCAGATGTTGATGATTCGGGGTATAGCCTTGTTCTTGGATAGAACTTATGTTAAGCAAACACCAAATGTGCGTTCATTGTGGGACATGGGCTTGCAACTTTTTCGGAAACATCTTTCCTTGTGTCCAGAAGTTGAGCACAAAACTGTCACTGGCCTTTTGCGAATCATAGAAAGTGAAAGATTAGGTGAAGCAGTGGATAGAACTCTACTAAATCATCTTTTAAAGATGTTCACAGCTCTGGGAATATATGCTGACAGCTTTGAGAAGCCATTCCTTGAATTCACATCTGAGTTTTATGCTGCTGAGGGAGTCAAATACATGCAGCAATCTGATGTTCCAGATTATCTGAAGCATGTTGAGAGACGTTTGCATGAAGAACATGAAAGATGTTTACTCTATTTGGATGCAAGCACAAGGAAGCCATTAATAGCAACCACAGAAAAACAACTTCTTGAACGTCATATTTCTGCAATTCTTGATAAGGGTTTTACTATGCTTATGGATGGAAATCGCATCCATGACCTTCAAAGAATCTACACTCTCTTTTCAAGGGTTAATGCCCTTGAATCATTAAGGCAAGCTTTAAGTTCATACATTAGGAGGACAGGGCAGAGGATTGTCTTGGATGAGGAGAAAGACAAGGATATGGTTGCTTCACTTTTAGAATTCAAGGCGTCTCTTGACACAATATGGGAAGAGAGCTTTTTCAGGAATGAAGTATTTTCAAACTCAATTAAAGATGCATTTGAGCATCTTATCAATCTCCGCCAGAACCGACCAGCAGAGTTAATTGCAAAATTTCTGGATGAGAAGCTTCGTGCTGGAAATAAGGGGACTTCTGAAGAGGAGCTTGAGAGTACACTTGATAAAGTCCTGGTTTTATTCCGGTTTATTCAGGGCAAGGACGTGTTTGAAGCTTTCTACAAAAAGGATCTTGCAAAAAGATTACTCTTGGGGAAGAGTGCTTCTATTGATGCAGAGAAGTCTATGATCTCTAAGCTGAAGACTGAATGTGGAAGCCAATTCACAAATAAACTGGAAGGAATGTTCAAGGACATTGAATTATCTAAAGAGATAAATGAGTCCTTCAAACAGTCATCCCAAGCTAGGACTAAACTCCCATCAGGGATTGAGATGAGCGTTCATGTCTTAACAACTGGGTACTGGCCAACATATCCCCCAATGGATGTTAGACTTCCTCATGAGTTGAACGTCTACCAGGACATATTCAAGGAGTTCTATCTAAGCAAATATAGTGGGAGGCGTCTAATGTGGCAAAATTCGTTGGGTCATTGTGTCTTGAAGGCAGAGTTTCCTAAAGGGAAAAAGGAACTGGCAGTGTCTTTATTTCAGACTGTTGTCTTGATGCTCTTTAATGATGCTGAGAAGCTTAGTTTCCAAGACATCAAGGATGCCACTGGAATTGAGGACAAGGAATTGAGAAGAACATTACAGTCACTTGCGTGCGGAAAAGTCCGTGTACTGCAAAAGTTACCCAAAGGAAGAGACGTTGAGGACGATGATTCATTTGTTTTCAATGAAGGATTCACGGCTCCCCTTTATCGTATAAAGGTAGATGCAGGGAGTCATCATCAGATTAAGGAAGAGGAAACTATTTGTGCATTTCATCTATCTTTTCATCTAATTTTATTTTATTTTTTAAAAACAACCCCATCTTCAAAAGTTTTACCTAATCAAATATTTCAATCAAATTACTTAATCTCACTTCAAAATTCAAATATGAATTTTCTCCTCTGTCAACAACTGGGGTTTCAGTTAGGTATATGCTGGACATACCTACTGCACAATTTGCTTACGTTATGTTTTCCTGGAAGTAAATATATAATGAAAATTGGGAAGATTCTTGTAAGTTTTATTTCCCAAGATGCACATTACGATTCAGATATTCTCTTTTAA 2607 0.4147 MSHPIERSATRIDTTDATSPNPPTTTSASPSSSSATAASATGSPPMKKAKSQAAAPCALDIKNGLHHHTQHHQQQDFNPSDDVVYDHSSMSIDEDLKPDDPAALSSSRGLVAANLSRKKAQPPQPAKKLVIKLVKAKPTIPSNFEEDTWAKLKSAICAIFLKRPDSCDLEQLYQAVNDLCLHKMGGNLYQRIEKECEAHISAAIQSLIGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALFLDRTYVKQTPNVRSLWDMGLQLFRKHLSLCPEVEHKTVTGLLRIIESERLGEAVDRTLLNHLLKMFTALGIYADSFEKPFLEFTSEFYAAEGVKYMQQSDVPDYLKHVERRLHEEHERCLLYLDASTRKPLIATTEKQLLERHISAILDKGFTMLMDGNRIHDLQRIYTLFSRVNALESLRQALSSYIRRTGQRIVLDEEKDKDMVASLLEFKASLDTIWEESFFRNEVFSNSIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVDAGSHHQIKEEETICAFHLSFHLILFYFLKTTPSSKVLPNQIFQSNYLISLQNSNMNFLLCQQLGFQLGICWTYLLHNLLTLCFPGSKYIMKIGKILVSFISQDAHYDSDILF* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00573 868 FunFam Cullin-4 like 604 759 - -
Pte9g00573 868 Gene3D Cullin Repeats 271 384 - -
Pte9g00573 868 MobiDBLite consensus disorder prediction 1 54 - -
Pte9g00573 868 ProSiteProfiles Cullin family profile. 489 718 IPR016158 -
Pte9g00573 868 FunFam Cullin-4 like 488 599 - -
Pte9g00573 868 Gene3D Cullin Repeats 488 599 - -
Pte9g00573 868 SMART cul_2 519 668 IPR016158 -
Pte9g00573 868 MobiDBLite consensus disorder prediction 7 41 - -
Pte9g00573 868 FunFam Cullin 3 269 385 - -
Pte9g00573 868 Gene3D Cullin; Chain C, Domain 2 604 758 - -
Pte9g00573 868 SUPERFAMILY Cullin repeat-like 142 485 IPR016159 -
Pte9g00573 868 Gene3D Cullin Repeats 385 487 - -
Pte9g00573 868 MobiDBLite consensus disorder prediction 67 86 - -
Pte9g00573 868 PANTHER CULLIN 145 758 IPR045093 -
Pte9g00573 868 Gene3D Cullin Repeats 136 267 - -
Pte9g00573 868 FunFam Cullin-4 136 267 - -
Pte9g00573 868 Pfam Cullin family 149 746 IPR001373 GO:0006511|GO:0031625
Pte9g00573 868 FunFam Cullin 4B 386 487 - -
Pte9g00573 868 SUPERFAMILY Cullin homology domain 486 756 IPR036317 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00573 Pte-Chr9 8402785 8412850 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00573 K10609 - qsa:O6P43_012978 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00532 16 9410124 9416703 Pte9g00573 9 8402785 8412850 RCT
Pte9g00573 9 8402785 8412850 Pte9g00573 9 8402785 8412850 RCT