Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01607 ATGGCTTTATATGAACATTCAGAAGCAGATTCCGATTTTATTCAATGGGGCCTTCGTATTCTTGACGGTGAACCAATTACTGGCCCAGGATACTATGACGGCATGAACCAATATAATGCTAATGATGGTTACGATACTCAATACTACCAAATTAATTATGATATGGCATCTAACACTGTGGAGAATGATGAGATAATTGCACGCACTCTCCAAGAAGAGTATTCGCAAGTAGATATTACAGAATCACTAGTATACTCTCATTCAGGAGAAGAAAACTTGCACTGTTCCACACCTGCATACGATTGGCAAAATTCATCTCTCCCAAACTACAGTTCTTCAGAAGGACATGATGATATCCATAATGAAGATGCCTGTAACGAGCATGCTAGTTCATCATCTATACTAGGTGATGGAGAGGATTACCCTTTTGTGGCTACTGATGAATATGCTTTTGATGATGAAGTTGATAAGAGAATAAGTCAAATGGTTCCAATTCGTCATGTTCCTAAAATCAATGGAGAAATTCCTTCAACTGACGAGGCAACCACTGATCATCAAAGACTTTTAGACAGATTGCAGTTATATGACTTCATTGAGCACACGGTGAATGGAGATGGTAATTGTCAGTTTCGTGCATTATCTGATCAATTGTATCAAAGTCCCGAGAACCACAAACTAGTTAGAAGACGAGTTGTGGAGCAGCTTAAATTGCATCCGGAGATTTATGAAGGATATGTCCCAATGGAATACAGTGAATATCAGGACAAGATGTCTATGAGCGGGGAATGGGGTGATCATGTGACACTTCAAGCAGCTGCAGATTTGTATGGCGTAAAGATATTCCTCATTACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCTCAATATGAGAAGCCAAAACGGGTTATCTTCCTGAGTTTCTGGGCCGAAGTGCATTACAACTCAATATATCCTCGAGGAGAATCAGATGTTGCTTCAACTGATCTGAAAAAGAAGAAAAGCTGGTGGAGCTTTCGAAATAAGCAATAA 1035 0.3952 MALYEHSEADSDFIQWGLRILDGEPITGPGYYDGMNQYNANDGYDTQYYQINYDMASNTVENDEIIARTLQEEYSQVDITESLVYSHSGEENLHCSTPAYDWQNSSLPNYSSSEGHDDIHNEDACNEHASSSSILGDGEDYPFVATDEYAFDDEVDKRISQMVPIRHVPKINGEIPSTDEATTDHQRLLDRLQLYDFIEHTVNGDGNCQFRALSDQLYQSPENHKLVRRRVVEQLKLHPEIYEGYVPMEYSEYQDKMSMSGEWGDHVTLQAAADLYGVKIFLITSFKDTCCIEILPQYEKPKRVIFLSFWAEVHYNSIYPRGESDVASTDLKKKKSWWSFRNKQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01607 344 PANTHER OTU DOMAIN CONTAINING PROTEIN 58 325 - -
Pte18g01607 344 Pfam OTU-like cysteine protease 203 290 IPR003323 -
Pte18g01607 344 CDD OTU_plant_OTU9-like 188 319 - -
Pte18g01607 344 FunFam OTU domain-containing protein 179 325 - -
Pte18g01607 344 Gene3D - 178 329 - -
Pte18g01607 344 ProSiteProfiles OTU domain profile. 197 321 IPR003323 -
Pte18g01607 344 SUPERFAMILY Cysteine proteinases 183 321 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01607 Pte-Chr18 27515059 27519275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01607 - - gmx:100811851 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01607 18 27515059 27519275 Pte18g01607 18 27515059 27519275 RCT
Pte18g01607 18 27515059 27519275 Pte16g00532 16 9410124 9416703 RCT