Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01674 GTTGGATCGGTGAGTGGCCAAAGAGAAAGGGTCCCACGCAAACAAACAATCAACCCCACCATAATATCCCCATAGACACAAAAAACACCATCTTCTGCCACAACACCACCACCATCTCCACTCTCTGCTCCCCCTTCTTTTCTCCTCACTCCCTCCCCCAATAAATTTTCCACACTCCCCCTTCTTTTCTTTTTTTATTCTTAATTTTATTTTCTTCATCCTCTCCTTCTTCTCTCTACTAAAATCCATACCCCAACATCTGCTTCCCCAGATACCGCTACATTTTATTTATTTCCCCCCTTTCCTATATTCTCACACCATATTATTAATTATTAATTATTAATTATTAATTATTAATTCATTCATTAATATCACACACACTCCATTTTTTATATTTATTATTATTATTATTATTATTATTATTATTATTATATATGCTTGCCGGCGATGCCGACGCCGGTCAGCATAGCGAGGCAATGCTTGACGGACGAAGCCGCGCGTGCACTCGACGACGCCGTTTCCGTCGCCCGCCGCCGAAGCCACCCGCAGACTACGTCGCTCCACGCTGTCTCCGCGCTCCTCGCGCTCCCGTCCTCCTCCCTACGCGACGCCTGCGGCCGCGCTCGCTCCGCCGCCGCAAGATTCTCCGCCTCGTATTCCCCGCGCCTCCAGTTCCGCGCGCTGGAGCTCTCCGTGGGAGTCTCCCTGGACCGGCTGCCGTCGTCGAAGGCGGCCTCCGGCGAGGAGGAACCACCTGTGTCGAACTCACTGATGGCGGCGATAAAGCGCTCTCAGGCAAACCAGCGGCGGCACCCCGAGAGCTTCCACGCTTTTCAACAAAGCCAGCTGGGAACGGCGGCGTCGTTTTTGAAAGTGGAACTGAAGCACTTCGTTTTGTCGATCCTAGATGACCCTATCGTGAGTCGCGTGTTCGCGGAGGCAGGGTTTCGAAGCTGTGACATCAAACTCGCGTTGCTCCAACCGCCTCTCCCTCCGGTTCAGCACCGGTTCACTAGCACCCCTCCTGTTTTTCTTCGCAACCTCGAGCCGGGCCTCCCCGATGAGAATTGCCGCAGGATCGCGGAGGTTCTCTCCCGGAATAGCAAGAGAAACCCTTTGCTTATGGGCGTTTACGCGAAAAGCGCTCTAAGGGGTTTCATTGAAATGGTTCGGAAGGGTTTCGGAGGTCCCATTTTAGGTTCCGAGTTGAGGGTGGTTTGTTTGGAGAGGGAGATTGGGGAGTTTGTGAGAGGTGACGGGAGTCTTGAAGAGAAGATAAGTGTGAGGTTGAAGGATTTGGAGCAATGTGAGGGTTCTAGTCCTAGTTCCAGGGTTGTAGTTAGTTTCGGGGAGGTTGAGGTTTTTGTGGGGGAGGATGTCAACGTTGATGCTGTTAGGTTTGTTGTTTCCGGATTGTCCAAGTTGTTGGAGGTTCGTGGTAACAAGCTTTCCATGGTGGGAGTGGCGGAAACCTCTCATACTTATTCTAAGTTCTTGAGTTTATTTCCTAATGTGGAAAACGATTGGGATCTTCATTTGCTCACTGTTACTTCCACAACTTCTTCTGTGGAAGCACTCTACTCTAAATCCAGGACTTTGTGCAAACTATCGAACGTGAATGAGTTTGTTTACTTGTCTTATTTTTGGATGAGGGAAAATAGGGATCTGTGTACTGTTCAGGTTCTTGCAGTAAAGGTGAGCCAACATGACCGCTTGATGGGGTCCTTTGTTCCCTTTGGTGGCTTCTTTTCTACACCTGAAGTTAGAAGTCCCGTAAGCTGTACAAATGCATCTTTTACCCGGTGTGACACATGCAATGAAAAATGTGAACAAGAAGTTGCAGATATTCTGAAGGTAGGTCCTTCATCTAGTAACTCAACAAGCTCACCCTGGTTACAAAAGGTTGTTAATGTGGACTCCCATAGAGGGTTGGATTCGGCAAAGAGTGAGCTCTATCATCCAGTGCAGACTAATGAAGAAAACACAAGTTTGAATGATAAGATCTTGGGATTTCAAAAGAAATGGAGTGATATTTGTCAGCGTCTTCATCACACAAGCTCACTACCTCAATTTGATATTTCTCAAACAAGGTCCCAAGCTCCAACAATAGAGGTTTTACGCTTTGGTCCAGGTTTTAGGGAAAGCAGCAATAAAGATTCATCACGCAATGAATTCCAATCTTCTAATCACATTCCCTACATGCCCAAAGAGTTTCATAGTATTTTTCCATTGAAACAGTTATCTGTTCCATTACCTTCTGATACAGTCAGTGTTAATACTGGAATTGATCATGTTCCAAAAGTTTCAGAGATGCTGCAAATTGATAAGAACCCTTGCGTTGCCCCTTCCATTACAACCACTAAGAGTGTGCTTGACCACAGATCATCTTCATCCCCTATTCCTGTGACCACAGATTTAGGATTGGGAACGCTATACTCGTCTACAGCTCAGGATCCAGATACCCCAAGACTACAACAAAATCAAAGAAAGCATCTTCAGCGCTTGTCAGACTCTGTTTTGACTGAATGTGATGTTATGAAGGAAAATACTTCTCACCAAATTGCTCGATCTTCCTGCTCTGGTTCAAATTTGGAAGGAAATTTTGGTTTAGTAGATTTCAAGTCTCTTAATCGACTTCTCACTAACAGGGTTGGCTGGCAGGATCAGGCCATATGTGCTATCAGTCAAACTTTGTCCCTTTGTAAATCTGGTGCAGGAAAGCGTAGAGGTTCACATGGTAGAGCAGACATATGGTTAGCTTTCCTTGGACCAGATAGAATTGGCAAAAGAAAAATTGCATCAGTTCTTGCAGAGACTATATTTGGAAACTCGGAAAGCTTAATCTCTGTGGATCTGGGCTTCCAGGACAGCTTTTACCCATTGAACTTGGTTTTTGAATGCCAAAAATCACATTATTATGATGTGCTTAGGAGGAAGACTATTGTGGACTACATTGCTGGGGAGTTGAGTAGAAAACCCCATTCTGTTGTCTTTCTTGAAAATATAGATAAAGCTGATTTTCTGGTGCAGACTAGTTTGTTGCAGGCAGTAAGAACAGGCAAATTTCCTGATTCGCATGGCAGAGCTATTAGCATCAATAACACAGTCTTTCTATTAACCTCAACTTTTTGCAAAGGTCATGGGTCCTTTGTTTTGGAGGAATATAAGATGTTTTCTGAGGAAAGAATCCTTGATGCCAAAAAATGCCAAATGCAATTGTTACTTGGACATGGTTCTGAGGATGCGAAAAGAATTGGTAGCTCAAATGTTAAGGTTGTACCCACAAAAGGTTTTTCCAAATCATCATCTCTGAACAAAAGGAAGCAGGCTTGTAGTAGTGATTACAAGGTAGGAGCAACAAGCAAGATGCAGAAACAGGACAACGAGGCTTCTCGATCCTATCTCGATCTAAATATGCCTGTAGAGGAGGTTGAAGAGAGTGATAATGACCATGAAAGTGAATCCGTAACAGAAACTACAGATGCCTGGTTAAATGATTTCTTTGATCAAATTGATGAGAAAGTGGTTTTTAAACCATTCAATTTTGATGAGCTTGCTGAACAAGTATTAAAAAGCATTGACATGCTATTTCAGAGGACATTCGGTTCAGAGGTTCAGCTGGAAATTGATTATGAGGTAATAACACACATACTAGCAGCTGCTTGGCTATCAGACAAGAAAAGTGCAGTGGAGGATTGGTTTGAACATGTTCTTGACAGAGGCTTCGTTGAAGCTCAGCAGAAGTACCTTCCTGCAGCTCAATATGTAGTGAAACTTGTTAATTGTGAATCCATTTTTGTGGAAGAGCAAGCTCCTGGTGTATACCTTCCAGCTAGAATTAACCTGGGCTAA 3852 0.4442 MPTPVSIARQCLTDEAARALDDAVSVARRRSHPQTTSLHAVSALLALPSSSLRDACGRARSAAARFSASYSPRLQFRALELSVGVSLDRLPSSKAASGEEEPPVSNSLMAAIKRSQANQRRHPESFHAFQQSQLGTAASFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDIKLALLQPPLPPVQHRFTSTPPVFLRNLEPGLPDENCRRIAEVLSRNSKRNPLLMGVYAKSALRGFIEMVRKGFGGPILGSELRVVCLEREIGEFVRGDGSLEEKISVRLKDLEQCEGSSPSSRVVVSFGEVEVFVGEDVNVDAVRFVVSGLSKLLEVRGNKLSMVGVAETSHTYSKFLSLFPNVENDWDLHLLTVTSTTSSVEALYSKSRTLCKLSNVNEFVYLSYFWMRENRDLCTVQVLAVKVSQHDRLMGSFVPFGGFFSTPEVRSPVSCTNASFTRCDTCNEKCEQEVADILKVGPSSSNSTSSPWLQKVVNVDSHRGLDSAKSELYHPVQTNEENTSLNDKILGFQKKWSDICQRLHHTSSLPQFDISQTRSQAPTIEVLRFGPGFRESSNKDSSRNEFQSSNHIPYMPKEFHSIFPLKQLSVPLPSDTVSVNTGIDHVPKVSEMLQIDKNPCVAPSITTTKSVLDHRSSSSPIPVTTDLGLGTLYSSTAQDPDTPRLQQNQRKHLQRLSDSVLTECDVMKENTSHQIARSSCSGSNLEGNFGLVDFKSLNRLLTNRVGWQDQAICAISQTLSLCKSGAGKRRGSHGRADIWLAFLGPDRIGKRKIASVLAETIFGNSESLISVDLGFQDSFYPLNLVFECQKSHYYDVLRRKTIVDYIAGELSRKPHSVVFLENIDKADFLVQTSLLQAVRTGKFPDSHGRAISINNTVFLLTSTFCKGHGSFVLEEYKMFSEERILDAKKCQMQLLLGHGSEDAKRIGSSNVKVVPTKGFSKSSSLNKRKQACSSDYKVGATSKMQKQDNEASRSYLDLNMPVEEVEESDNDHESESVTETTDAWLNDFFDQIDEKVVFKPFNFDELAEQVLKSIDMLFQRTFGSEVQLEIDYEVITHILAAAWLSDKKSAVEDWFEHVLDRGFVEAQQKYLPAAQYVVKLVNCESIFVEEQAPGVYLPARINLG 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01674 1134 CDD RecA-like_ClpB_Hsp104-like 723 894 - -
Pste8g01674 1134 SUPERFAMILY Double Clp-N motif 12 124 IPR036628 -
Pste8g01674 1134 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1102 - -
Pste8g01674 1134 Gene3D - 10 178 IPR036628 -
Pste8g01674 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 722 1072 IPR027417 -
Pste8g01674 1134 Gene3D - 718 1030 IPR027417 -
Pste8g01674 1134 MobiDBLite consensus disorder prediction 561 581 - -
Pste8g01674 1134 ProSiteProfiles Clp repeat (R) domain profile. 8 183 IPR004176 -
Pste8g01674 1134 Pfam AAA domain (Cdc48 subfamily) 770 896 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01674 Pste-Chr8 10657300 10662939 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01674 8 10657300 10662939 Pste8g01674 8 10657300 10662939 ECH
Pste8g01674 8 10657300 10662939 Pste7g02202 7 20410396 20416357 ECH
Pste8g01674 8 10657300 10662939 Pste8g01200 8 6337946 6345553 ECH
Pste7g01613 7 14954512 14960890 Pste8g01674 8 10657300 10662939 ECH
Pste7g02202 7 20410396 20416357 Pste8g01674 8 10657300 10662939 ECH
Pste4g02602 4 18349348 18353828 Pste8g01674 8 10657300 10662939 ECH
Pste7g01613 7 14954512 14960890 Pste8g01674 8 10657300 10662939 PCT