Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02602 CTTCATTCTTTGTCTTTTAGACCAAACCAAATCTCATTTTCCTCACACAAGGCCTCATAACCAAGAAGTCTCATGCATGGTCCAAATTAGCATATCCCTCATCCATTTATATTATCATCATATCCCTCAAAACCTAGCTTCAAAACCAACAGCTCGGTTCCTCGGTACCCTACCCTACAAATTACGACACCACCGCCTTACTATACCCAAGATGCCAACAACACCACCTTGATGAAACTCAATATCAAGATTTTAAAAAACAATCTGTGGTTGCGATTTTATTCGCAATCATATATCAGGTCTCTCTGACCATTGCTATCTGCATCAGTCGCATTTGTCTGCAATATCAAGGATAGGGACAAACTGCAACTGCAACTGCAACTGCGACTGCAAGTTTGTTACTTATTTTTTCACCTTCTTTTTAGTGTTGTTATAGCATCATCCCTAGAGATGAGAACAGGAAGCTGCGCTGTGCAACAGGGTCTAACCCCAGAAGCTGCAAGCATAGTGAAGCAAGCAGTGACACTGGCGAAGCGTCGTGGCCACGCGCAAGTGACACCTCTCCATGTGGCAAACACGATGCTCTCAATCACCAACGGGCTTCTGAGAACCGCGTGTCTCCAATCCAACTCTCACCCTCTTCAGTGCAAGGCCTTGGAGCTTTGCTTCAACGTGGCTTTGAATCGGTTGCCAGCTTCAACCTCTTCTAGCCCCATGTTGCAAGGTTCTCACCACCACCACTCTCACTCGTGTCCCTCTATCTCAAACGCTTTGGTCGCAGCATTTAAACGCGCTCAAGCACACCAACGACGCGGATCCATTGAGAATCAGCAACAGCCTCTCTTGGCAGTGAAAATAGAACTCGAGCAACTCATTATTTCGATCTTGGATGACCCTAGTGTTAGCCGCGTCATGAAAGAAGCAGGTTTCTTTAGCACTCAAGTGAAAAGCAACGTTGAACAAGCGGTTTCATTGGAAATATGTTCTCAGAATAATGGTGATGGTAATAACAATAAGGCAAAGGAGAACAATAGTAGCGGAGAGAAAGGGTTGGTGTTGGATCCTATTAGGGATGAGGACGTTGCTAGTGTTATTGAGAATTTGGGGAGTCAGAGAAAGAGAAGTGTTGTGATTGTGGGAGAGTGTGTTACTAGTCTTGAGGGCGTAGTTAGGGGAGTGATGGAAAAGGTTGATAAAGGGGATGTTGGTGAGAGTCTTAGGGGTGTCAAGTTTATCTCTCTTTCTCTTTCTTCCTTTGGGAATGTTTCAAGAGTGGAGGTGGAGCAAAAGGTTGAGGAGCTTAGGAGTCTTGTGAAGGCAAGTGAACATAGTAAAGGGTATGTTTTGTATTTGGGGGATCTTAAATGGGTGTTTGATTATAGGGCTCGTGGATCACAAGGGAGAGCGTGTTATTGTCCTGTGGATCACACGGTTATGGAAATTGGGAATCTTGTTAATGGGGTTGAAGAGAATGGTGGAAGGTTTTGGGTAATGGGTGTTGCCACTTTTCAAGCTTACATGAGATGCAAAAATGGCCAGCCATCGTTGGAGACTCTTTGGGGTCTTCATCCTATTACTATTCCTGCAGGAAGCTTGCGTTTGAGTCTCATCACTGACAGTGGTCTACAAAACCAGTCCCCAAACAAGAAAGCTGACAGCAGAACTAGCTGGCTCTTACTCGAAGGAGTGGGGGATGATCAGAAACAACAAGCATGCTTCGCGGAACCTTCCACCAAGAATGAGACCGAATTTCGAATCTTGCAAAGCAGTACTTGTAATAGTGACTCCTCATGTTCAACCCTCCCTGCATGGCTCCAACAGTACAAAAATGAGAATAAAGGATTTACCTATAATGATCAGAACTGCGTCCCAGTGGGAGAGCTTTGCAAAAAGTGGAACTCTATGTGTAGTTCAATCCAAAAGCAACCTTATCCTTCAGACAAAACCCTCACATTATCCTCAGTATCACCCTCTTCCTCAACCTCAGGATTTTCGCACGAACAGCAACATTCTAATTTGCACCAAACCCACCATGAGGGGCAAGTGACTGGACCCAAAGACCCATTGAACAACCACCATTTTTGGATCTCCAACAATGGTAGCAACAACGTTAATCCCAATGAACCACCTTTGAGAGTGTACATTCCAGAGAACAATGGCACCACAAAACAACCATTCTCGTCATCAAACCCAAGCTCCAACCCTAATTCCGCTTCTTCTAGTGACATCATGGAAGTGGAGCACATGAGCAGGTTCAAAGAGTTAAACTCTGAGAATCTGAAAACACTGTGCAATGCTTTGGAGAAAAAAGTGTCGTGGCAGAAAGATATAATTCCAGAAATTGCAAGCACCGTTTTGCAATGCCGTTCTGGCATGGTGAGAAGAAAAGGGAAAGTGAGAAACAGTGAAGAAGTGAAAGAAGAAACGTGGTTGTTCTTCCAAGGTGTTGATGTGGAAGGCAAAGAGAAAATAGCAAGAGAATTGGCTCGGCTTGTTTTCGGGTCCCAAAACGACGTCGTTTCCATAGCACTTAGCATTTTTGCTTCAACAAGAGCAGATTCAACTGAGGATTATAGCAGGAACAAAAGATCAAGAGAAGAAGCAAGTTGCAGTTATATTGAAAGATTTGCAGAAGCTGTAAGTAATAACCCTCATAGAGTGTTTCTTGTTGAAGATATAGAGCAAGCAGATTATTGTTCTCAACTTGGTTTCAAAAGGGCCATCGAGAGAGGAAAAGTTGTGGATTCAAACGGTGAAGAAGTTGCACTTTGTGATGCCATCATCATTCTAAGCTGTGAAAGTTTCAGTTCAAGGTCAAGGGCATGTTCTCCTATGGTCAAACAGAAATCATTGACTGAAGAGGAAAAGAATGGTGACATTGTTACTTTGGAGGAGACAAGCCCTTGTGTTTCTTTGGATTTGAATATTTCCATTGATGATGAAAACGAGGTTGAGGATCGGTCGGTGGATGAAATTGGACTTCTTGAATCTGTAGACAGAAAGATTCTCTTCAACTTTCAGGAATTGTGAGAAGAGTTTTTCAAGAACACCTAATTTATTTTTTTTAAGTTTTAGTTTAGGCTTCTTTTAATTCTCTTTATTCATCATGTCTTTGTATTCTCAGGCATTTCCTAGGGCTAGGGATGAAAGAAATTGCGTGCCCTTTAGTTTTACTATGTAACTAGATATTATGTATATAATTACCAGGTATATTCAACTATCAATGTCAC 3230 0.4279 MRTGSCAVQQGLTPEAASIVKQAVTLAKRRGHAQVTPLHVANTMLSITNGLLRTACLQSNSHPLQCKALELCFNVALNRLPASTSSSPMLQGSHHHHSHSCPSISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMKEAGFFSTQVKSNVEQAVSLEICSQNNGDGNNNKAKENNSSGEKGLVLDPIRDEDVASVIENLGSQRKRSVVIVGECVTSLEGVVRGVMEKVDKGDVGESLRGVKFISLSLSSFGNVSRVEVEQKVEELRSLVKASEHSKGYVLYLGDLKWVFDYRARGSQGRACYCPVDHTVMEIGNLVNGVEENGGRFWVMGVATFQAYMRCKNGQPSLETLWGLHPITIPAGSLRLSLITDSGLQNQSPNKKADSRTSWLLLEGVGDDQKQQACFAEPSTKNETEFRILQSSTCNSDSSCSTLPAWLQQYKNENKGFTYNDQNCVPVGELCKKWNSMCSSIQKQPYPSDKTLTLSSVSPSSSTSGFSHEQQHSNLHQTHHEGQVTGPKDPLNNHHFWISNNGSNNVNPNEPPLRVYIPENNGTTKQPFSSSNPSSNPNSASSSDIMEVEHMSRFKELNSENLKTLCNALEKKVSWQKDIIPEIASTVLQCRSGMVRRKGKVRNSEEVKEETWLFFQGVDVEGKEKIARELARLVFGSQNDVVSIALSIFASTRADSTEDYSRNKRSREEASCSYIERFAEAVSNNPHRVFLVEDIEQADYCSQLGFKRAIERGKVVDSNGEEVALCDAIIILSCESFSSRSRACSPMVKQKSLTEEEKNGDIVTLEETSPCVSLDLNISIDDENEVEDRSVDEIGLLESVDRKILFNFQEL 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02602 859 Coils Coil 274 294 - -
Pste4g02602 859 MobiDBLite consensus disorder prediction 496 591 - -
Pste4g02602 859 MobiDBLite consensus disorder prediction 180 195 - -
Pste4g02602 859 ProSiteProfiles Clp repeat (R) domain profile. 8 176 IPR004176 -
Pste4g02602 859 SUPERFAMILY Double Clp-N motif 12 166 IPR036628 -
Pste4g02602 859 Gene3D - 588 821 IPR027417 -
Pste4g02602 859 MobiDBLite consensus disorder prediction 567 591 - -
Pste4g02602 859 MobiDBLite consensus disorder prediction 180 201 - -
Pste4g02602 859 MobiDBLite consensus disorder prediction 542 558 - -
Pste4g02602 859 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 855 - -
Pste4g02602 859 MobiDBLite consensus disorder prediction 496 529 - -
Pste4g02602 859 Gene3D - 9 174 IPR036628 -
Pste4g02602 859 Gene3D - 202 374 IPR027417 -
Pste4g02602 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 600 784 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02602 Pste-Chr4 18349348 18353828 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02602 4 18349348 18353828 Pste7g02202 7 20410396 20416357 ECH
Pste4g02602 4 18349348 18353828 Pste8g01200 8 6337946 6345553 ECH
Pste4g02602 4 18349348 18353828 Pste4g02602 4 18349348 18353828 ECH
Pste4g02602 4 18349348 18353828 Pste7g01613 7 14954512 14960890 ECH
Pste4g02602 4 18349348 18353828 Pste8g01674 8 10657300 10662939 ECH