Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01215 AACGTTGGAGTGTGTCTAAACAAAAGTGAGTATAAAGGACAATGGATGATGGAAGGCGCTAAAATCGGATTCCATTTATGGAAGCGAACCTGTCTCTGTCTCTCTCAAGTCATAAGTCTGATGAATTGGTTATGATGAATTGGAGACTCGAGAGAGAAAGGGACGGTACCCATTCCATTCCATAACATATCCCTCCCTTTCTTTCTCATTCATTAACTGCATACATACATCAATGGGTATCGTCACATACAGTTACAAAATGTTCAAGTGCTTCAACAGAACTTTCGCCATCTCCGAGCAGTCCCCTCCGCCGGACGTCAGGGACGCTTTCACCCTCTTCGCCGACGACGGCCCCTCCATGTCCTCCCAACAGCTCCTCCGCTTCCTTCACCACCACCAACTCCAAACTGACTGCACCCAAGAGGATTCCGACCACATCGTCGACACCGTCCTCCAATCCCGCAAACTAGACAACCACGACGACCAATGCCAACCCGACCACAACGGTCTCACCCTCGACGAGTTCTTTCGCTTTCTGTTCCTTCTCGATTTCAACCAACCCCTCATATCCCAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCATATATACAGGGCACAACTCCTATCTGACTGGGAATCAGCTTAGCAGCGATTGCAGTGATGTGCCAATTATTAAGGCTTTGCAACGAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACCAAAGATGATATCGTCGTAGTTCATGGAAGGACACTTACTACTCCTGTCTCACTTATCCAATGTTTGAAGTCCATACAAGAGTATGCTTTTGTTAAATCTGACTACCCAGTCATCATAACCTTAGAAGACCACCTTACACCATATCTTCAAGCTAAAGTAGCAGAGATGATAACACAAGTATTTGGAGATATGCTCTATTATCCTCAGACTGATCTTCTGACAGAATTCCCCACACCAGAATCGGTGAAAGGTCGAATACTTGTATCAACCACACCACCAAAAGAATATGTTCAATCCAAGCAATTCAAGGATAGTGACAGTGAGAGGGAATCAACTGAAGAAGGATCATCACCAGCCCTTATCACTGAAGTGGAAGTTGTTGATGAGAAGTTGAATGGAAGTGATCTTGATGAGGAAGGCATAAATGCTCGCGATAAAAAATCAGACCAACAGAGTGCACTAGAGTACAAACGTTTGATTACAATTCATGCTGGGAAGCCAAGGGGTCCTATAAAAGACCACTTAAACATTGTTGGGGGTGTAAGGCGCTTGAGCTTGAGCGAACAGGAACTTGAAAGGGCTTCTGCCACACATGGATCTGATATTGTTAGATTTACACAGAAGAATATTATTAGGGTGTATCCAAAGGGAACACGTGTTAACTCCTCAAATTACAGGCCCCATATAGGATGGATGTATGGAGCTCAAATGGGGCATGGAAAATCACTCTGGTACATGCATGGGATGTTTAGATCAAATGGTGGGTGTGGTTATGTGAAAAAGCCTGCATTTCTAATAGAAAATGACCCAAATATTGAGGTTTTTGATCCTAAAAGAACATTACCAGTGAAGACGACATTGAAGGTAAAAGTATATATGGGAAATGGGTGGAGCTCAGATTTCAGCAAAACACACTTTGATGCATTCTCTCCACCGGACTTCTACACAAAGGTTTGCATTGTTGGAGTACCAGCTGATAACGCCAATAAGAAGACTAAGATAATTCATGATGACTGGTTTCCCGTTTGGGACGAAGAGTTTGAATTTCCCTTGACTGTTCCAGAGCTAGCTTTGCTCCGGATAGAGGTTCGAGAGTATGATAAGCATGAAAAGGATGACTTTGGTGGGCAAACATGTTTGCCAGTCTCTGAGCTAAGATCTGGTTTCCGAGCAGTCTCTCTATTTGATCAGAAAGGCGAGCAATTAAAAACTGTAAAGCTTTTAATGCGGTTTCAATTCATATGAATTTTAAGGATTAGACATTATTTAGCCGTAAGTTGTAAGTTGTGACTGTATTATGGACTCAAAAGGTTATATCTAACTTATCTTCACCTTCAACACAACAAACATATTACTATTAGCAACATCCAATTGTATACCTGAGTGTTGACATCTTGTGGTGAGGCTTGAGAGCCATGTGAGTTTTGAGGTGTATGCTGATGCGGCACCTGATACCAGAAAGCCATAACATAGCGTGG 2220 0.4275 MGIVTYSYKMFKCFNRTFAISEQSPPPDVRDAFTLFADDGPSMSSQQLLRFLHHHQLQTDCTQEDSDHIVDTVLQSRKLDNHDDQCQPDHNGLTLDEFFRFLFLLDFNQPLISQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTKDDIVVVHGRTLTTPVSLIQCLKSIQEYAFVKSDYPVIITLEDHLTPYLQAKVAEMITQVFGDMLYYPQTDLLTEFPTPESVKGRILVSTTPPKEYVQSKQFKDSDSERESTEEGSSPALITEVEVVDEKLNGSDLDEEGINARDKKSDQQSALEYKRLITIHAGKPRGPIKDHLNIVGGVRRLSLSEQELERASATHGSDIVRFTQKNIIRVYPKGTRVNSSNYRPHIGWMYGAQMGHGKSLWYMHGMFRSNGGCGYVKKPAFLIENDPNIEVFDPKRTLPVKTTLKVKVYMGNGWSSDFSKTHFDAFSPPDFYTKVCIVGVPADNANKKTKIIHDDWFPVWDEEFEFPLTVPELALLRIEVREYDKHEKDDFGGQTCLPVSELRSGFRAVSLFDQKGEQLKTVKLLMRFQFI 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01215 584 SMART plcx_3 117 261 IPR000909 -
Pste8g01215 584 Gene3D - 24 115 - -
Pste8g01215 584 Gene3D Phosphatidylinositol (PI) phosphodiesterase 116 447 IPR017946 GO:0006629|GO:0008081
Pste8g01215 584 Pfam C2 domain 456 558 IPR000008 -
Pste8g01215 584 Gene3D C2 domain 451 584 IPR035892 -
Pste8g01215 584 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 354 434 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01215 584 SMART plcy_3 326 436 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01215 584 MobiDBLite consensus disorder prediction 267 287 - -
Pste8g01215 584 SUPERFAMILY EF-hand 8 119 IPR011992 -
Pste8g01215 584 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 11 583 IPR001192 GO:0035556
Pste8g01215 584 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 117 258 - -
Pste8g01215 584 PRINTS Phospholipase C signature 380 401 IPR001192 GO:0035556
Pste8g01215 584 PRINTS Phospholipase C signature 245 262 IPR001192 GO:0035556
Pste8g01215 584 PRINTS Phospholipase C signature 550 560 IPR001192 GO:0035556
Pste8g01215 584 PRINTS Phospholipase C signature 148 168 IPR001192 GO:0035556
Pste8g01215 584 PRINTS Phospholipase C signature 122 140 IPR001192 GO:0035556
Pste8g01215 584 CDD C2_PLC_like 454 583 - -
Pste8g01215 584 Pfam Phosphatidylinositol-specific phospholipase C, X domain 119 259 IPR000909 -
Pste8g01215 584 ProSiteProfiles C2 domain profile. 436 566 IPR000008 -
Pste8g01215 584 SMART C2_3c 456 564 IPR000008 -
Pste8g01215 584 MobiDBLite consensus disorder prediction 269 283 - -
Pste8g01215 584 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 456 583 IPR035892 -
Pste8g01215 584 FunFam Phosphoinositide phospholipase C 451 584 - -
Pste8g01215 584 SUPERFAMILY PLC-like phosphodiesterases 117 437 IPR017946 GO:0006629|GO:0008081
Pste8g01215 584 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 355 435 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01215 Pste-Chr8 6440018 6445314 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01215 5 583 Acyl Lipid Metabolism Gene Families AT2G40116 59.504 0.0 721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02195 7 20266230 20270116 Pste8g01215 8 6440018 6445314 ECH
Pste8g01215 8 6440018 6445314 Pste8g01215 8 6440018 6445314 ECH
Pste8g01215 8 6440018 6445314 Pste8g01220 8 6462739 6467221 PCT
Pste7g02195 7 20266230 20270116 Pste8g01215 8 6440018 6445314 PCT