Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01220 CTTAGAGGGTCACACTGAGAGAAATTAAGGATGGGAAATAACATGGCAACCTACAACAGATACAAAAGTTTCATGTTCTTTATCAGAAAGTTCAAGGTGACCGAGCCAGTTCCACCTCAGGACCTTGAGGAGGCGTTTTCAAAGTTCACTGGAGGAGGGTCCCACATGTCCGCGGAGCAGCTCCACCGTTTCCTGGTGGAGCACCAGGGTGAAGAGGACTTTACCTTATCGGATTCTGTGAAAATAGTTGACAAGGTTTTGCAAGACAGAAAGACATGTCAAGAAATTCTTAAGGTTGATCAAAATCGACAACATGAGATCACCCTTGATGAGCTCTTCCGTTTTTTGCTTCATGATGATTCCAACGGTCCCTTGAAAGCTGAGGTACATCATGACATGAGGGCTCCATTGTCACGTTATTTCATATATACAGGCCATAACTCCTATTTGAAAGGGAATCAACTCAGCAGTGACTGCAGTGAAGAGCCAATCATAAAAGCTTTGAAAAGAGGCGTGCGTGTTATTGAGCTTGATTTATGGCCAACTTGCTATAAGGATGATATTAAAGTAGATCATGGATGGACTCTTACCAACCCTGTCTCAGTTATCAAATGTCTGAAGTCCATAAAAGAATATGGGTTTGTTGCATCTCCGTACCCAGTGATCATAACTATAGAAGACCATCTTACAAGAGATCTTCAAGCTAAATTTGCAGAAATGGCAACTCAAATATTTGGAGAAATGCTTTATTACCCTGGGACAGAATGCTCCTGCTTAACAGAATTCCCTTCCCCGGAATCACTAAAATATCGAGTTATTATATCAGCCAAACCCCCGAAAGAACGTTTTCAGTCCAACCGTATCAGAGACAATCCTATGCTGAATGATAGTGATTCATCTGAAGAAGGATCATCGGAAAATGAATCTCCAGACTCCAGTAGAAACGAAATGGAGACTGAGGACACGAATGGAAGTGATCGTGATGAGGGAAACGCAAGTGCAAGCGAAGGTTACAACAAACCATATCAGGATTTTTCATCTGATTATAAACGGATAATTACTATCCATAATACGAAGCTCAAAGGTTGCCTGAAGGATAAATTGAAAACAGATGGCGAACTTAGACGCCTAAGTTGGAGTGAGAAGACCCTTGAAAAGGCTTCAGAATCTCATGGAACATATATTCTTAGGTTCACACAGAAAAATATCCTCAGGATTTACCCGAGTGCAATGCGTGTCAAATCCTCAAATTTCAAACCACATATTGGGTGGATTTATGGGGCTCAGATGGTTGCATTCAATATGCAGGGTCATGGCAAATCGCTTTGGTTGATGCAGGGGATGTTCAGGGCAAATGGAGGATGTGGTTATGTAAAAAAGCCTCAAATTCTAATGCAGAAGTATTTAAGCGAAAATGACTTTGATCCAACAAGGATAATCACAGTGAAGAAGAAATTAAAGGTAAAAGTATACATGGGACATGGGTGGAGCTCAGATTTCAGTCCTACACACTTTGATAAGTGCTCTCCGCCAGACTTCTACACTAATGTTCGTATTGTTGGAATGCCTGCTGATGTTGTAAAGAAGAAAACAAAGGTTATGATGGACAACTGGTTTCCTGTTTGGGATGAAGAATTTGAATTCTCTTTAACTGTTCCAGAGCTTGCATTGCTTCTGATACAAGTAAAGGACAAAGATCAGGGAAAGGATGACTTTGCTGGGCAGACATGTTTGCCAGTCTCAGAGCTAAAACAAGGATTTCGTTCACTACCTTTATATAACAAAAAGGGAGAAAAATTTAAATCTGTGAAGCTATTATGCGGTTTCAATTTGAATAAATTGTAAACCATAGAAACCACTCATCTAGGATATACGTCCCTCTTTTGCAGCCTTGCATGGTGTCTCCATGCTTTGACCACATGATTGCTACAAATGCAATTCTCACAACTAATCAATCAACAATTTATACTTTTTTTATTCATAAACATTTATACTATTTATTACTAATTTAAATTTTATTGGGATACTTAAA 2032 0.3962 MGNNMATYNRYKSFMFFIRKFKVTEPVPPQDLEEAFSKFTGGGSHMSAEQLHRFLVEHQGEEDFTLSDSVKIVDKVLQDRKTCQEILKVDQNRQHEITLDELFRFLLHDDSNGPLKAEVHHDMRAPLSRYFIYTGHNSYLKGNQLSSDCSEEPIIKALKRGVRVIELDLWPTCYKDDIKVDHGWTLTNPVSVIKCLKSIKEYGFVASPYPVIITIEDHLTRDLQAKFAEMATQIFGEMLYYPGTECSCLTEFPSPESLKYRVIISAKPPKERFQSNRIRDNPMLNDSDSSEEGSSENESPDSSRNEMETEDTNGSDRDEGNASASEGYNKPYQDFSSDYKRIITIHNTKLKGCLKDKLKTDGELRRLSWSEKTLEKASESHGTYILRFTQKNILRIYPSAMRVKSSNFKPHIGWIYGAQMVAFNMQGHGKSLWLMQGMFRANGGCGYVKKPQILMQKYLSENDFDPTRIITVKKKLKVKVYMGHGWSSDFSPTHFDKCSPPDFYTNVRIVGMPADVVKKKTKVMMDNWFPVWDEEFEFSLTVPELALLLIQVKDKDQGKDDFAGQTCLPVSELKQGFRSLPLYNKKGEKFKSVKLLCGFNLNKL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01220 604 SMART plcx_3 121 267 IPR000909 -
Pste8g01220 604 Gene3D - 27 113 - -
Pste8g01220 604 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 468 IPR017946 GO:0006629|GO:0008081
Pste8g01220 604 PRINTS Phospholipase C signature 393 414 IPR001192 GO:0035556
Pste8g01220 604 PRINTS Phospholipase C signature 414 432 IPR001192 GO:0035556
Pste8g01220 604 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Pste8g01220 604 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Pste8g01220 604 PRINTS Phospholipase C signature 568 578 IPR001192 GO:0035556
Pste8g01220 604 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Pste8g01220 604 FunFam Phosphoinositide phospholipase C 470 602 - -
Pste8g01220 604 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 475 600 IPR035892 -
Pste8g01220 604 Pfam C2 domain 475 576 IPR000008 -
Pste8g01220 604 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 13 600 IPR001192 GO:0035556
Pste8g01220 604 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 365 452 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01220 604 SUPERFAMILY EF-hand 12 123 IPR011992 -
Pste8g01220 604 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 368 454 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01220 604 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 267 IPR000909 -
Pste8g01220 604 MobiDBLite consensus disorder prediction 297 317 - -
Pste8g01220 604 CDD C2_PLC_like 481 600 - -
Pste8g01220 604 MobiDBLite consensus disorder prediction 271 330 - -
Pste8g01220 604 ProSiteProfiles C2 domain profile. 456 584 IPR000008 -
Pste8g01220 604 SUPERFAMILY PLC-like phosphodiesterases 121 456 IPR017946 GO:0006629|GO:0008081
Pste8g01220 604 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 267 - -
Pste8g01220 604 SMART C2_3c 475 582 IPR000008 -
Pste8g01220 604 SMART plcy_3 339 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste8g01220 604 Gene3D C2 domain 470 604 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01220 Pste-Chr8 6462739 6467221 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01220 3 599 Acyl Lipid Metabolism Gene Families AT2G40116 54.708 0.0 646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01215 8 6440018 6445314 Pste8g01220 8 6462739 6467221 PCT