Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02195 GGAAATTGTTTTGATGGCAGGGAAGGGTGAGAAAGAAAGTGGAGAAGTACATGGTGAAGTTCTTAAATTTATTGACAAAAAAGGGTGAAGCTCAAAAGGCAGAACCTCCTTTGGACATCAAGGAAGCCTTTTCCAAGTTTGCGAGAGGAGGGAACCTATTGAAGAAGGATCAGTTCCTTCAGTTCATGGTGGAGCACCAGGGAGAAAATATCAGCACCTTAGAGGATTTGGATAAAATTGTTGAAAACTTTTTGCAAGTAGGAAAGTCTACCACTAAAAGACAAGGATTAAGTCTAAGTGACTTCATGGATTTCTTGCTTCATAATTTCAATGACCCCTTGAAAGATGAGGTACATCATGATATGAATGATCCCTTGTCACATTATTTCATGTATACGGGACACAATTCCTACCTGACTGGGAATCAACTTACCAGTGGGAGCAGTGACGAACCAATTATAGAGGCTTTGAAACAAGGTGTACGAGTAATTGAACTAGATTTATGGCCATCCAAAGCTTCAATTAATGATGGAATTAAAGTGGTTCACGGAAGAACTTTAACCACTCCTGTTCCAGCATCCAAATGCCTAAACTCCATCAAGGAATACGCATTTTACAAATCTGATTATCCAGTAATTCTAACACTGGAAGACCACCTAACTCCAAAACATCAGGATATTTTTGCAGAAATGGCAACTGCAATATTTGGAGAAATGCTTTATTTTCCTCATAGTGATTATTTGACAGAATTCCCCTCACCAGAATCATTGAAAAAACGGATAATTATATCTACCAACCCACCAAAGGAGTCTCAACAATCTGATAGCATCAGCAAACCTGTGCTAAATGGTATTGAACATTCTGAAGAAGAACCATGCGGAATGCAATTGCCAGATTCTGTGGTCAAACTGAAAAATGAGGACCAGAATGCAAGTGATGAAGATCAGGACGATATATATACAAGTGACAACAAACCAAACCAGCAGGGTCCACGTAAATATAAACACTTGATTGCAATCCCTGGTGGGAAATCAAAAGGTTCTATGAAAGATCGATTGAAAGATGATAATAAAGTTAGACGGCTAAGTTTGAGTGAGAAGAAACTCATAAGTGCTTCTGAGTTTCATGCAACCGACATTATTAGGTTTACACAGAAAAATATCCTCAGAGTTTATCCTAAAGGAGAACGTGTCCAATCCTCAAATTTCAAGCCATTTTTAGGGTGGTTGTATGGAGCTCAGATGGTTGCATTCAATATGCAGGGGCATGGCAAATCACTCCGGTTGATGCAGGGGATGTTCAGAGCAAATGGAGGGTGTGGTTATGTTAAAAAGCCTGAATTTATGATCCGTACACTTCCAGATGAAGACATGTTTGATCCCAAAAGAACAATGCCAGTGAAGCAGATATTAAAAGTAAAAGTATACAGAGGAGATGGCTGGAGTTCAGATTTCAGTGCAACACACTTTGATCGATTCTCTCCACCAGACTTTTACACGAAGAGGAAAACAAGTGTAAAAATGGACACATGGTATCCTGTTTGGGATGAAGAATTTGCATTCAAGCTGAGGGTTCCTGAGCTTGGCTTGCTTCGGATAGAAGTAAAGGATAAAGATAAGGGAAAGGATGACTTTGCAGGACAAACTTGTTTGCCAGTATCAGAGCTAAGACATGGATTTCGGTCAGTCCCTCTGTATGACCGAAAGGGAAAGAAACTCAATTCTGTAAAGCTTCTAATGCGGTTTATGTTTGAGACATCAAATAAATTTTAG 1772 0.3933 MVKFLNLLTKKGEAQKAEPPLDIKEAFSKFARGGNLLKKDQFLQFMVEHQGENISTLEDLDKIVENFLQVGKSTTKRQGLSLSDFMDFLLHNFNDPLKDEVHHDMNDPLSHYFMYTGHNSYLTGNQLTSGSSDEPIIEALKQGVRVIELDLWPSKASINDGIKVVHGRTLTTPVPASKCLNSIKEYAFYKSDYPVILTLEDHLTPKHQDIFAEMATAIFGEMLYFPHSDYLTEFPSPESLKKRIIISTNPPKESQQSDSISKPVLNGIEHSEEEPCGMQLPDSVVKLKNEDQNASDEDQDDIYTSDNKPNQQGPRKYKHLIAIPGGKSKGSMKDRLKDDNKVRRLSLSEKKLISASEFHATDIIRFTQKNILRVYPKGERVQSSNFKPFLGWLYGAQMVAFNMQGHGKSLRLMQGMFRANGGCGYVKKPEFMIRTLPDEDMFDPKRTMPVKQILKVKVYRGDGWSSDFSATHFDRFSPPDFYTKRKTSVKMDTWYPVWDEEFAFKLRVPELGLLRIEVKDKDKGKDDFAGQTCLPVSELRHGFRSVPLYDRKGKKLNSVKLLMRFMFETSNKF 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02195 573 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 346 432 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste7g02195 573 Pfam Phosphatidylinositol-specific phospholipase C, X domain 105 248 IPR000909 -
Pste7g02195 573 SMART plcx_3 103 249 IPR000909 -
Pste7g02195 573 MobiDBLite consensus disorder prediction 290 316 - -
Pste7g02195 573 Gene3D Phosphatidylinositol (PI) phosphodiesterase 101 446 IPR017946 GO:0006629|GO:0008081
Pste7g02195 573 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Pste7g02195 573 PRINTS Phospholipase C signature 534 544 IPR001192 GO:0035556
Pste7g02195 573 PRINTS Phospholipase C signature 392 410 IPR001192 GO:0035556
Pste7g02195 573 PRINTS Phospholipase C signature 134 154 IPR001192 GO:0035556
Pste7g02195 573 PRINTS Phospholipase C signature 108 126 IPR001192 GO:0035556
Pste7g02195 573 PRINTS Phospholipase C signature 371 392 IPR001192 GO:0035556
Pste7g02195 573 SMART plcy_3 317 433 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste7g02195 573 SMART C2_3c 453 548 IPR000008 -
Pste7g02195 573 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 16 567 IPR001192 GO:0035556
Pste7g02195 573 Gene3D - 18 100 - -
Pste7g02195 573 SUPERFAMILY EF-hand 4 105 IPR011992 -
Pste7g02195 573 Gene3D C2 domain 447 572 IPR035892 -
Pste7g02195 573 ProSiteProfiles C2 domain profile. 427 550 IPR000008 -
Pste7g02195 573 SUPERFAMILY PLC-like phosphodiesterases 103 434 IPR017946 GO:0006629|GO:0008081
Pste7g02195 573 CDD C2_PLC_like 451 568 - -
Pste7g02195 573 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 453 567 IPR035892 -
Pste7g02195 573 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 103 246 - -
Pste7g02195 573 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 343 431 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Pste7g02195 573 Pfam C2 domain 483 541 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02195 Pste-Chr7 20266230 20270116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02195 1 568 Acyl Lipid Metabolism Gene Families AT2G40116 51.980 0.0 585
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02195 7 20266230 20270116 Pste8g01215 8 6440018 6445314 ECH
Pste7g02195 7 20266230 20270116 Pste7g02195 7 20266230 20270116 ECH
Pste7g02195 7 20266230 20270116 Pste8g01215 8 6440018 6445314 PCT