Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03081 CAAAACCATCCAACAAGGGAAACCGAATATTGTTCCATTTTTCAATTATGGCTAGTTCAATTCAATTCTCCCCTACTTTGGTCACATTGTGTCTCTTCCAACTCCTAGCAGGTTCGTATTCAACGACATTCACGATTGTTAACAAGTGCAGCTACACAATTTGGCCCGGCATTTTATCCGGTGCCGGAACCACGCCGCTGTCCACCACGGGCTTTGCTTTACAACCCGGCGAGTCCAACGTTATCGCCATGCCGGCCGCCTGGTCCGGCCGGCTCTGGGGGCGGACACTCTGTTCCCAGGACGCCACCGGAAAATTCACCTGCCTCACCGGCGATTGCGGCTCCTCCGCGGTGGAATGCAACGGCATGAACGCCATCCCACCTGCCACTCTGGCCGAGTTCACCCTAAACGGCGCCGGAGGACTTGACTTCTTCGACGTGAGCCTCGTCGACGGTTACAACCTTCCCATGATCGTGGAGCCTCAGGGCGGAACCGGTGCTGGAAACTGCACCGCCACGGGGTGCGTGGTTGACCTTAACACACCGTGCCCGACGGAGCTTAAGGTGACGAGCAGCGGAGAGGGCGTGGCGTGTAAAAGCGCGTGTGAAGCTTTCCACGATCCACAGTATTGCTGTAATGGCGCTTACGCCACTCCTGACACATGCAAACCCAGTTCCTACTCGCAGTTCTTCAAGAGCGCGTGCCCACGCGCTTACAGTTACGCATACGACGATGGCACCAGCACCTTCACTTGTGCCTCTGCCGATTATACCATCACTTTCTGCCCCCAACCATCCACAAGGTCGATTAAATCGGGGAATGGAAATTACCCAATGGCGGTGGACACTTCGGGAGGTAACGTAAACCGGAGAGCAAAGAGTGGTTTGGCGGTGACGGTGACGGTGACTGTGTCTGTTTTGGTGGCATTTGTAATTGTTGCAACTCAATTAGGTGGTCCTTCAGCTTCAGTGGCAATATTGTTGCATTAAAATGGGTGGTGGGCTATGACTATCAACAATCTAGCTAATTTTATATACAACATAACAGTCTCAATCTATATTGGGTGATCAAGTTGCATCATATTCCGCGGAATCAAGGTCGGCAACTTGTGTGTGAAGAGATGCGCAGGGCACCTAGCAGAGATTTCCACTTCTCAACTTGTATAACTAAACATTAATTGCCCATCTCTTCATCCACCACTTATTTAGAGTAGGAAGGTTCAGATGCCCAGACACCATTAGGCAGCAGCCACGTGGAATTTACATCAGCTTGCGCACCACTCTCTCTCTCTCTCGCCATTCATCGCCCTCCTCACCCCAAAACAGGAGGCCATTTTCGGAACAATTTCACATTTTTATCATTAAAATATCGCTTTCATCCCTTTGTAAATATGAACATCAAGTTTATTCACTAGAGAACAAGGACTAGTACAATTTTCATTAATTTCTTGCAAATGTTCTTTCCTCGCCTAATGGCGCCAGATACATGTGTGTGCGTTTCACCTACTTTCTCAATTGTTAATTGGTTTCATAATTGAAATTTGAAACATCTATTAC 1556 0.4916 MASSIQFSPTLVTLCLFQLLAGSYSTTFTIVNKCSYTIWPGILSGAGTTPLSTTGFALQPGESNVIAMPAAWSGRLWGRTLCSQDATGKFTCLTGDCGSSAVECNGMNAIPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMIVEPQGGTGAGNCTATGCVVDLNTPCPTELKVTSSGEGVACKSACEAFHDPQYCCNGAYATPDTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCASADYTITFCPQPSTRSIKSGNGNYPMAVDTSGGNVNRRAKSGLAVTVTVTVSVLVAFVIVATQLGGPSASVAILLH 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03081 313 ProSiteProfiles Thaumatin family profile. 25 247 IPR001938 -
Pste1g03081 313 Gene3D Thaumatin 26 247 IPR037176 -
Pste1g03081 313 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Pste1g03081 313 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Pste1g03081 313 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Pste1g03081 313 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Pste1g03081 313 PANTHER OS03G0233200 PROTEIN 14 247 IPR001938 -
Pste1g03081 313 SMART tha2 28 247 IPR001938 -
Pste1g03081 313 CDD TLP-PA 27 246 - -
Pste1g03081 313 PIRSF PR5 1 291 IPR001938 -
Pste1g03081 313 Pfam Thaumatin family 32 247 IPR001938 -
Pste1g03081 313 FunFam THAUMATIN-LIKE PROTEIN 1 26 247 - -
Pste1g03081 313 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03081 Pste-Chr1 13796450 13798435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03081 7 248 Receptor kinase-like Gene Family AT5G38280 50.607 2.20e-82 260
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01371 1 4357557 4359960 Pste1g03081 1 13796450 13798435 ECH
Pste1g03081 1 13796450 13798435 Pste1g03081 1 13796450 13798435 ECH
Pste1g01374 1 4373732 4376016 Pste1g03081 1 13796450 13798435 ECH