Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01374 GGCGAGATTAAGATGGTGAGAAACATTATATTATTTTTGACGCACTATCTCAAAGGCTGTGTTGGTCTGATAATTGATTATTGTTGAATGTTGAGAGGTGAGAGGTGAGAGGTGAGAGGTACAGGGGAACCCCTCTCTCACTCATTGTCCCCAGTGCAGTATCCTCTCACTTTTACCCAGAAAAACACTCTCGTCGTTTTGTACCTTCTCATCCCAACACTCAGTTCTGAGGCAGCAGTGGCATTTTGCTACCCAACTTCAACATGTTCATTTCATTACCAAAACCTATGGATCTCATGCCATCTTGCTGTTTCACTCTCCTACTCCTACTCCTCACTCCCCCAGCTGTCAAAGGTGCCACCTTTACATTTGTAAACAGATGCGATTACACAGTGTGGCCGGGCATTCTCGCAAATGCCGGTAGCCCACCCCTCCAAAGCACGGGTTTCGAGCTTCCCAAGGACACTTCTCGCGCCCTCCAAGCGCCAACCGGCTGGTCCGGCCGTTTCTGGGGGCGAACCGGCTGCACCTTCGACGGATCCGGATCCGGATCCGGGTCGTGTCTGACAGGGGACTGCGGCTCCGGGCAGGTGGAATGCAACGGGGCGGGAGCGGCCCCGCCGGCCACACTGGCGGAGTTCACGCTTGGTAGCGGAGGGCAAGACTTCTACGACGTGAGCCTGGTGGACGGGTACAATGTTGCCATGATCGTTGAGGGCAGTGGCGGGTCGGGTGTTTGCGCATCCACGGGCTGCACTTCGGATCTGAACCAGCAATGCCCCCCGGAGCTGAGAGCCTCGGAGGGCAGCGCGTGCAAGAGCGCGTGTGAGGCTTTTGGCAGCCCGGAGTACTGCTGCAGCGGTGCGTATGGCTCGCCCGCCACTTGTAGGCCTTCCATTTACTCCGAGATGTTCAAGTCTGCTTGCCCTAGATCTTATAGCTATGCATACGACGATGCTACCAGCACTTTTACATGTACCGGCGCTGATTATACCGTTACCTTCTGTCCACCCTCTCCAAGTCAGAAATCTTCACGTGATACGAGTAGCAACAGCAATACGAACCCGAACCCGATGAGCTCAACATCACAAGGGTCAGTGACAGGAACAGGATCCGAAGGGGGGGCAGTGGTATACACGGGTGCGGAGAACGGGGTGGTGTATAACTCAGTAACTGAAGCCGGGTCAAGTTCAGGATCCGGAGGAGAAACAATGCTAGCTGATGGTTCGTATTTAGCTGGTTTGGCCATGGGAGACTCCCCTAGAACAACAGTTTCCACCGCCTTTCTCTATTCCACTTGCTTTTTGCTTATTATCTCCTCCTTTCTTTAGCTGCACCACCATTATTGTGCCTTTTCTTTCTTTCTTAAATGTAAATGTCTCTTAGATTGTCGTGTTTTTCATGGTGGGTTCAAGAATTTTGCTTTGCCAGTAAAGCTGGCAGATTCTCTCGGATTGGCCAAAAAAAATATTCCGTGTTTCATTCGTTAAAGTGCATGTTTTTATATTATTAATTCTCTTCTCCCCCATTTCTGCTATTTTGGGCTGGCGTTGTTGGTTTCACATGTGTATATATGCT 1578 0.512 MFISLPKPMDLMPSCCFTLLLLLLTPPAVKGATFTFVNRCDYTVWPGILANAGSPPLQSTGFELPKDTSRALQAPTGWSGRFWGRTGCTFDGSGSGSGSCLTGDCGSGQVECNGAGAAPPATLAEFTLGSGGQDFYDVSLVDGYNVAMIVEGSGGSGVCASTGCTSDLNQQCPPELRASEGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKSACPRSYSYAYDDATSTFTCTGADYTVTFCPPSPSQKSSRDTSSNSNTNPNPMSSTSQGSVTGTGSEGGAVVYTGAENGVVYNSVTEAGSSSGSGGETMLADGSYLAGLAMGDSPRTTVSTAFLYSTCFLLIISSFL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01374 355 PRINTS Pathogenesis-related protein signature 33 45 IPR001938 -
Pste1g01374 355 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Pste1g01374 355 PRINTS Pathogenesis-related protein signature 81 92 IPR001938 -
Pste1g01374 355 PRINTS Pathogenesis-related protein signature 134 150 IPR001938 -
Pste1g01374 355 Pfam Thaumatin family 38 249 IPR001938 -
Pste1g01374 355 ProSitePatterns Thaumatin family signature. 96 112 IPR017949 -
Pste1g01374 355 MobiDBLite consensus disorder prediction 250 286 - -
Pste1g01374 355 CDD TLP-PA 33 248 - -
Pste1g01374 355 PANTHER OS03G0233200 PROTEIN 20 249 IPR001938 -
Pste1g01374 355 Gene3D Thaumatin 32 249 IPR037176 -
Pste1g01374 355 SMART tha2 34 249 IPR001938 -
Pste1g01374 355 MobiDBLite consensus disorder prediction 250 285 - -
Pste1g01374 355 ProSiteProfiles Thaumatin family profile. 31 249 IPR001938 -
Pste1g01374 355 SUPERFAMILY Osmotin, thaumatin-like protein 32 250 IPR037176 -
Pste1g01374 355 FunFam THAUMATIN-LIKE PROTEIN 1 32 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01374 Pste-Chr1 4373732 4376016 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01374 17 266 Receptor kinase-like Gene Family AT5G38280 46.008 1.95e-74 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01374 1 4373732 4376016 Pste1g01374 1 4373732 4376016 ECH
Pste1g01374 1 4373732 4376016 Pste1g03081 1 13796450 13798435 ECH