Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01371 TGATTAACAGCTAGTAGTAGTAAGAAGTAAGAAGGAAGCTAAAGAAAAAGAGAAAAGAAAAAGTAAAGAGGAGGATGCATTGAGCTTGACAAGAAAGTGAACCAATTTGGTGGTTCTGAGCTGCTTATTGCTGGTGTTCCACACTGCACATGGGTCGCCTTCTTCTCTTTCTCATTATTCTCAATCTCAGTCTTGTCTCATTATCCTTCCTCTCAGAGGTAGAATCAGCGTCCTTCAAGATCGTCAACAAGTGCCGCCACACCATATGGCCGGGATTACTCTCCGGCGCCACCTCGCCGCCGCTTCCCACCACTGGATTCACCCTCCAAACAGGAAAATCCAGGACTTTAAACATCCCCAAATCTTGGTCGGGTCGGATATGGGCACGGACTCTCTGCGGTCAAGGCCCTGACGGAAAGTTCTCTTGCGCCACCGCCGACTGTGGTTCAGACAAAGTAGAGTGCGTGGGTGGCGCCAAACCGCCCGCGACATTGGCGGAGTTCACTCTGAACGGCGCCGACGGCTTGGATTTCTACGACGTGAGCTTGGTGGACGGTTATAACCTCCCTATGCTGATCGTGGCCAAGGACGGCACCAGGGGTGGGTGCAGCGCCACCGGCTGCCTCGTCGACCTCAACGGCGGGTGCCCGGCTGAGCTAAGGGTGGCGCGTTCAAACGGCAGCCGCGGGAGCGTGGCATGCCGGAGCGCGTGCGAGGCTTTCGGTGATCCTCGCTTTTGCTGCAGCGATGCGTACTCCACGCCTGACACGTGTGGCCCTTCTCCTTATTCATTGTTCTTCAAGCACGCTTGCCCACGCGCCTACAGCTACGCGTATGATGACAAGACCAGCACCTACACATGTGCCTCCGCTAACTATTTGATCATTTTCTGCCCATTGCCCTATACCAGCCAAAAAGTGTTGGGAGCGCGCAAAGATGGGGCACAGCTTCCTCTGGTAAATAAAACTATGATGTACTTATCAAAGCTACAATCAGGTGGTTCTTCTTCACCCTCAGGTCTGATTCAAATGCAAAGTATAGCAGTTTATATATGCTGCCTCTATTTTAGCAGCTGTCTTCCTGTCCTGCCCTAGCTAATGGATTGCGTTTGCTTCGACAATTCAGTTTTCTGGTAGATATATATAGTTACACCCCTCTTCACCCTTCTTACCAAATCACTACCCCTCATGCAGGATATCATATTCATATTCATATGTTTATATAGGAATTAAACACTGTAAATCCTTTTCCTTTTTGTTTATATTGCTTGTCTCTTTTTTACTTCCACATTGCAATACTTCCATTTTAGCCCATCTTTTTAACTACTTGTTTTATTATCAATTTCCAAACCATTCTGTAGTCAAATTTTGCTACTTATGAGACACGGATTGTAATCAGTGCCATAGTGTATACATGAGATAGGTTTATGAAAGCGCAATTTTTGGTTTTCAT 1452 0.478 MGRLLLFLIILNLSLVSLSFLSEVESASFKIVNKCRHTIWPGLLSGATSPPLPTTGFTLQTGKSRTLNIPKSWSGRIWARTLCGQGPDGKFSCATADCGSDKVECVGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKDGTRGGCSATGCLVDLNGGCPAELRVARSNGSRGSVACRSACEAFGDPRFCCSDAYSTPDTCGPSPYSLFFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYTSQKVLGARKDGAQLPLVNKTMMYLSKLQSGGSSSPSGLIQMQSIAVYICCLYFSSCLPVLP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01371 314 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Pste1g01371 314 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Pste1g01371 314 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Pste1g01371 314 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Pste1g01371 314 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Pste1g01371 314 Pfam Thaumatin family 33 249 IPR001938 -
Pste1g01371 314 CDD TLP-PA 28 248 - -
Pste1g01371 314 Gene3D Thaumatin 27 249 IPR037176 -
Pste1g01371 314 ProSiteProfiles Thaumatin family profile. 26 249 IPR001938 -
Pste1g01371 314 PANTHER OS03G0233200 PROTEIN 17 249 IPR001938 -
Pste1g01371 314 FunFam THAUMATIN-LIKE PROTEIN 1 27 249 - -
Pste1g01371 314 SMART tha2 29 249 IPR001938 -
Pste1g01371 314 SUPERFAMILY Osmotin, thaumatin-like protein 28 249 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01371 Pste-Chr1 4357557 4359960 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01371 7 249 Receptor kinase-like Gene Family AT5G38280 51.626 4.15e-84 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01371 1 4357557 4359960 Pste1g01371 1 4357557 4359960 ECH
Pste1g01371 1 4357557 4359960 Pste1g03081 1 13796450 13798435 ECH
Pste1g01371 1 4357557 4359960 Pste1g03086 1 13838430 13839862 ECH