Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03086 CAAGCACTCACTCTTTTTCTTCCTTGAAAGAGAGTGTTAGAACTGTAATACTGCTTCAAGTACCCACTAAGTACTAACTAACACACAATGGCTCACCCACACTCTTCCCAACCCTTCCTCGCCTTCGCACTCTTCCTCCTATTCCGAGGGGTTTCAGGGGCGACATTTACTTTGGTGAATAAGTGTGATTACACAGTATGGCCAGGAATTTTAGGAACACCAGACCTCGGAAGCACAGGTTTTGAACTTACCAAGGGAGGTTCCAAAAGCTTCCAGGCTCCCACCGGTTGGTCCGGTAGATTCTGGGGCAGAACCGGTTGCCAATTCGACGCTTCAGCCAAAGGAACCTGCGCCACCGCCGATTGCGGCTCCGGCGAGCTCAACTGCAACGGCGCCGGAGCCTCCCCGCCTGCCACGCTCGCCGAGTTCACGCTCGGCACCGGCTCCCTCGACTACTACGACGTAAGCCTGGTGGATGGCTACAATTTGCCCATGATGGTGGCGGCGAAAGGCGGCTCGGGCTCCTGCGCCGCCACCGGCTGCAGCGAGGATCTCAACCGCCGCTGCCCCTCAGAACTGCGAGTGGAGGGTGGCGACGCGTGTCAGAGCGCGTGCGCCGCGTTTGGGAAACCCGAGTATTGTTGCAACGGTGCGTTTGGTAGCCCCTCTACGTGCAAGCCTTCCATGTACTCGCAAATTTTCAAGTCCGCATGTCCCAAAGCCTACAGCTACGCCTACGATGATGCCACTAGCACCTTCACCTGTTCCGCTGCTGATTACACAATCACATTTTGTCCTTCCTCTCCTAGTTTAAAGTCTTCAACGGATTCGAGTCCAAAGGGAATCGAGTCTGGTTCGGGAACAGGTTCATCTGTTGAACAATCTGAATTAGCTTCTACTTCGTGGTTAGCCGACATGGCAACGGCTACAGCTGCTTCAACACGGACACAGCCTTTTGTTGCTTCAAAGCTCTTTTTTTTTGTCCTGGTTCTTTTCATTCTTTCTCTTTTGGTCGTTTAGTTTCTTGGTCCCTCTCTCTTATGGTGACGTCTCAACAGCATCCTTATCTTCCTCCCTTTCCTTTCACACAGACACAGACTAGATCCATAACATTGATTCATATGTATTGTAATTCTTAAATTATCATATACTTATGTAAATTGTAAAGTGGCAGTATTATAAAGGATCGTTTCAATCATTTGTTGCGGG 1209 0.507 MAHPHSSQPFLAFALFLLFRGVSGATFTLVNKCDYTVWPGILGTPDLGSTGFELTKGGSKSFQAPTGWSGRFWGRTGCQFDASAKGTCATADCGSGELNCNGAGASPPATLAEFTLGTGSLDYYDVSLVDGYNLPMMVAAKGGSGSCAATGCSEDLNRRCPSELRVEGGDACQSACAAFGKPEYCCNGAFGSPSTCKPSMYSQIFKSACPKAYSYAYDDATSTFTCSAADYTITFCPSSPSLKSSTDSSPKGIESGSGTGSSVEQSELASTSWLADMATATAASTRTQPFVASKLFFFVLVLFILSLLVV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03086 310 CDD TLP-PA 26 236 - -
Pste1g03086 310 FunFam THAUMATIN-LIKE PROTEIN 1 25 237 - -
Pste1g03086 310 SUPERFAMILY Osmotin, thaumatin-like protein 25 238 IPR037176 -
Pste1g03086 310 Pfam Thaumatin family 31 237 IPR001938 -
Pste1g03086 310 SMART tha2 27 237 IPR001938 -
Pste1g03086 310 PANTHER OS03G0233200 PROTEIN 14 237 IPR001938 -
Pste1g03086 310 PRINTS Pathogenesis-related protein signature 227 236 IPR001938 -
Pste1g03086 310 PRINTS Pathogenesis-related protein signature 71 82 IPR001938 -
Pste1g03086 310 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Pste1g03086 310 PRINTS Pathogenesis-related protein signature 50 59 IPR001938 -
Pste1g03086 310 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Pste1g03086 310 ProSiteProfiles Thaumatin family profile. 24 237 IPR001938 -
Pste1g03086 310 MobiDBLite consensus disorder prediction 240 264 - -
Pste1g03086 310 Gene3D Thaumatin 25 237 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03086 Pste-Chr1 13838430 13839862 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03086 10 241 Receptor kinase-like Gene Family AT5G38280 48.980 1.20e-73 237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03086 1 13838430 13839862 Pste1g03086 1 13838430 13839862 ECH
Pste1g01371 1 4357557 4359960 Pste1g03086 1 13838430 13839862 ECH