Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4155 ATGATGACATCACATGACATCGATCCTGATGTTGTTCGCTGGGGCTTACATCTTCTAGATGTTTGTACATTTTCCCATGGTGGTAACCCTGGTGTTGTAACTCGATGTGATCCCGATTTAAGTCAAGTTGAATATGTTAGGGAAGGCTTCTGCGAGCCTTCTTATGTTGAAGATGATGAGGCTGTTGCACGTGCTTATCAAGAAGAATTATCACAACTTGATTCTATGGAGGCTTCTGGGATTTCAAACTTTGAGAATGAGCAAGTGCGGGCATCCGTAAATGCGCAAGATTGGCTATCTTCTTCAAATAGGAGCTATAACTTCGGCAATGAATCTTGCCAGAACTCTGTTGGCGAATCATGCCAGAACTCTGTTGGCGAATCATGCCATATGAAAGGAATGGAGGAAAGTTGTCCAAATGAAAGGGAAAACGATGCACATGAAGTTGGATTATTTGGTTCGTCTTCTAGGTCAGGAGAGTTTCCCACCATTACTGATGAAATGTGGCATTCATTGGAAATATCGGATGAGTCTTCTCTTGACGGTGAAGTAGGAAAAAGATTAAACCAGATGGTTTCAGTTCCGCATGTTCCTAAAACCAACGAAAAAATGCCATCTGACGATGAAGAAATATCCGACCATCAAAGGCTGCTAGACAGACTGCAGTTATATGAACTGATTGAGTCTAAGGTTGAAGGAGATGGTAACTGCCAGTTTCGTGCTTTGTCAGATCAACTCTATCGCTCTCCAAACCTCCACAAATTTGTACGGGAACAAATTGTTCAACAGCTCAAGTCCGACTCAGATCTGTATGCTGGTTATGTTCCAATGTCTTATAGTGAATATTTAAAGAAGATGAGCAAGAGTGGTGAGTGGGGTGATCATGTCACGTTGCAGGCTGCTGCAGATTGGTATGGCGTCAAAATATTTGTGATTACATCTTTCAAGGACACATGTTACATTGAGATTCTTCCACAGATACAGAAGTCTGGAAGGGTAATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAATTCAATTTATCCGGAAGGAGAAATGCCTTCATCTTATATAAAGAAAAAGAAGAGATGGTGGAATTTCAGCAGTTAG 1110 0.4144 MMTSHDIDPDVVRWGLHLLDVCTFSHGGNPGVVTRCDPDLSQVEYVREGFCEPSYVEDDEAVARAYQEELSQLDSMEASGISNFENEQVRASVNAQDWLSSSNRSYNFGNESCQNSVGESCQNSVGESCHMKGMEESCPNERENDAHEVGLFGSSSRSGEFPTITDEMWHSLEISDESSLDGEVGKRLNQMVSVPHVPKTNEKMPSDDEEISDHQRLLDRLQLYELIESKVEGDGNCQFRALSDQLYRSPNLHKFVREQIVQQLKSDSDLYAGYVPMSYSEYLKKMSKSGEWGDHVTLQAAADWYGVKIFVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNSIYPEGEMPSSYIKKKKRWWNFSS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4155 369 ProSiteProfiles OTU domain profile. 226 350 IPR003323 -
Psa6g4155 369 Pfam OTU-like cysteine protease 233 318 IPR003323 -
Psa6g4155 369 SUPERFAMILY Cysteine proteinases 213 349 IPR038765 -
Psa6g4155 369 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 26 367 - -
Psa6g4155 369 Gene3D - 207 355 - -
Psa6g4155 369 PANTHER OTU DOMAIN CONTAINING PROTEIN 26 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4155 Psa-Chr6 366186318 366192901 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4155 - - gmx:100820379 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1011 3 95730738 95733540 Psa6g4155 6 366186318 366192901 ECH
Psa6g1675 6 93041134 93044797 Psa6g4155 6 366186318 366192901 ECH
Psa6g4155 6 366186318 366192901 Psa6g4155 6 366186318 366192901 ECH