Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1675 ATGGCATTACATGAGCATTCGGATGTTGTTCAATGGGGTATGAATCTTTTTGATGTTGATCCTCGTTATAGTCCTGGATACTACGGTGACTTAATTCAACATGATACTGGTGATGTCTATGGTGAAAACTACTTTCACAGTCATTATGATTCTGAAAGTAACCAAGTAGAGAATGATGAGATCATTGCACGGACTCTTCAAGAAGAGTTTTCACAGCTAGAGATTGCCGAGCGTTCGGGTTATTCACAGCCAGATGAAGAACACTATCATGCTTCTGAGACTTCATATGATTGGCAAAACACACCGATGATGAACTATTGTTCAGGAGGTCATAATTATGTTAATGAAGGAGTTGGAGACATAGAAACTTCTAGCTCATGCTGTAGTCCTGGTGAAGTGGGGGGATGCTCATTGGAGCTTGTTGACAACTATCCATTTGATGATGAAATAGAGAGGAGATTGAGTGAGATAACTCCCATTCCTCATATTCCAAAAATTAATGGAGAAATTCCTTCTATTGATGAAGCAACATCAGATCATGAAAGGCTTCTGGATAGATTGCAATTATATGACTTTGTGGAACGTAAGGTACAGGGTGATGGTAATTGCCAGTTTCGTGCATTATCTGATCAGTTGTATAACACACCTGATCACCACAAGTTTGTCAGACGAAAAGTTGTAAACCAGCTGAAGTCTCATCCAGATATTTATGAAGCATATGTTCCCATGGAATATAGTGAATATTTGGAAAAGATGTCCGGGAGTGGTGAATGGGGAGATCACGTCACTCTTCAAGCTGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAAGACACGTGTTGCATTGAGATTCTTCCTAGTTTTGAGAAGCCAAAAGGAGTGATTTTTATAAGTTTTTGGGCAGAGGTGCATTACAACTCCATCTATCCTCAAGGAGATATAACTTCAAATGAGTCAAGAAAGAAGAAAAGGTGGTGGAGTTTTGAGAGCTCGCATTAA 1014 0.3945 MALHEHSDVVQWGMNLFDVDPRYSPGYYGDLIQHDTGDVYGENYFHSHYDSESNQVENDEIIARTLQEEFSQLEIAERSGYSQPDEEHYHASETSYDWQNTPMMNYCSGGHNYVNEGVGDIETSSSCCSPGEVGGCSLELVDNYPFDDEIERRLSEITPIPHIPKINGEIPSIDEATSDHERLLDRLQLYDFVERKVQGDGNCQFRALSDQLYNTPDHHKFVRRKVVNQLKSHPDIYEAYVPMEYSEYLEKMSGSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPSFEKPKGVIFISFWAEVHYNSIYPQGDITSNESRKKKRWWSFESSH* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1675 337 Gene3D - 173 322 - -
Psa6g1675 337 SUPERFAMILY Cysteine proteinases 179 316 IPR038765 -
Psa6g1675 337 Pfam OTU-like cysteine protease 198 284 IPR003323 -
Psa6g1675 337 PANTHER OTU DOMAIN CONTAINING PROTEIN 25 333 - -
Psa6g1675 337 ProSiteProfiles OTU domain profile. 192 316 IPR003323 -
Psa6g1675 337 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 25 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1675 Psa-Chr6 93041134 93044797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1675 - - gmx:100811851 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1675 6 93041134 93044797 Psa6g4155 6 366186318 366192901 ECH
Psa6g1675 6 93041134 93044797 Psa6g1675 6 93041134 93044797 ECH