Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1011 ATGGTTTTATATGAACATTCCGATGTTTATCAGTGGGGTCTTAATCTTCTTGACGGTGACCCCGGTTATAATCTGAATTACTATGACAATATAGTTCAACATGATAACGGCGACATCTATAATGGACACTACTTTCATAGTACTTATGATAACGAATGTAACCATGTGGAGAATGACGAGATCATTGCCCGTGCTCTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAGTCTTCAAGGTATTTACAGACAGATGAAAATCAGTTTCATGTTAATGAGACCGAGCCAGCATATGATTGGCATGATTCTTCAATGGTTAATTATTGTTCAGAAGGCCATGATTATGCCCAAGAAGGAGTTGGCGACGTAGAAAGTTCATGTTCTAGTCCTCCTGAAACAGAGGAATATTCATTGGAGTTAACCGACAATTATCCACTTGACGATGAAGTAGGGAAGAGATTGAGCCAAATGATACCTATTCCGCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCTACATCAGATCACCAAAGGCTTCTGGATAGATTGCAATTATATGACTTTGTGGAGAACAAGGTGCACGGTGATGGCAATTGCCAGTTCCGTGCACTGTCAGATCAACTGTATCATGCCCCCGAGCACCACAAGTTTGTGAGGAGACAAGTTGTGAGCCAGCTCAAATCTAATCCGGAGATTTATGATGGATATGTTCCCATGGAATATGGTGACTATTTGGACAAGATGTCAAAGAGTGGAGAATGGGGCGATCATGTCACCCTCCAAGCTGCTGCAGATTCGTATGGTGTGAGAATATTTGTCATGACTTCTTTCAAAGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTTCTGAGTTTTTGGGCAGAGGTGCATTACAATTCCATCTACCCTCAAGGAGATATACCTTCAGAAGAGTCGAGAAAAAAGAAAAGATG 989 0.4065 MVLYEHSDVYQWGLNLLDGDPGYNLNYYDNIVQHDNGDIYNGHYFHSTYDNECNHVENDEIIARALQEEFSQLEIAESSRYLQTDENQFHVNETEPAYDWHDSSMVNYCSEGHDYAQEGVGDVESSCSSPPETEEYSLELTDNYPLDDEVGKRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVENKVHGDGNCQFRALSDQLYHAPEHHKFVRRQVVSQLKSNPEIYDGYVPMEYGDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDIPSEESRKKKR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1011 329 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 25 329 - -
Psa3g1011 329 Gene3D - 173 319 - -
Psa3g1011 329 ProSiteProfiles OTU domain profile. 192 316 IPR003323 -
Psa3g1011 329 PANTHER OTU DOMAIN CONTAINING PROTEIN 25 329 - -
Psa3g1011 329 SUPERFAMILY Cysteine proteinases 178 316 IPR038765 -
Psa3g1011 329 Pfam OTU-like cysteine protease 199 284 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1011 Psa-Chr3 95730738 95733540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1011 - - aip:107648617 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1011 3 95730738 95733540 Psa6g4155 6 366186318 366192901 ECH
Psa3g1011 3 95730738 95733540 Psa3g1011 3 95730738 95733540 ECH