Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4030 ATGGATAAGCTTTCATTTGAAGGTGTTCATTATGGTATTGTGAGTCAAATGAGTTTCATTTGGCAACAAACTAGGGTACCCCTTGTTGTTCCAATGCTGAAAATTTTAGTCTTTTTGTGTTTGGCTATGTCTGTTATGCTTTTTGTGGAGAGAGTTTATATGGGTATAGTCATTGTTTTTCTTAAGCTGTTTGGTCATAAACCAGAGAAACATTACAAATGGGAGCCACTTATGGATCATGATATTGAGCTTGGAAACTCTTGTTTTCCTATGGTTTTGGTTCAAATCCCAATGTATAATGAAAAAGAGGTGTATCAGTTATCAATTGGATCTGCATGTGGGTTATCATGGCCATCTGATAGAATTATTATTCAAGTTCTTGATGATTCAACAGATCCAATCATTAAGAATATGGTGGAGGTGGAATGTGAGAGATGGAGAAGGAAAGGGTTAAACATAAAGTATGAGATAAGAGAAAACAGAAATGGTTACAAAGCCGGTGCTCTCAAGGAAGGAATGAAGCATAGTTATGTCAAACTTTGTGACTATGTTGCCATCTTTGATGCTGATTTTCAACCTGAGTCGAACTTTCTTTGGCGCACCATTCCGTTCCTCGATCAAAATCCTCAAGTTGGATTAGTCCAAGCTCGATGGAAATTCGTTAATGCTGATGAATGCTTGATGACAAGAATGCAAGAGATGTCATTGGACTATCATTTCCTTGTGGAGCAAGAAGTTGGATCCTTAACTCATGCTTTCTTTGGTTTCAATGGCACAGCTGGTGTTTGGAGAATTTCAGCACTAAACGAAGCTGGTGGATGGAAGGATCGCACTACAGTTGAAGATATGGACTTAGCAGTAAGAGCTAGTCTCAAGGGATGGAAATTTGTGTACCTTAGTGACCTCAAGGTGAAAAGTGAATTGCCAAGTACCTTCAAAGCCTACCGTTATCAGCAACATAGATGGTCATGTGGTCCAGCCAATCTTTTCAGAAAAATGGCAATGGAAATCATAAGAAACAAGAAAGTCACCATGTGGAAGAAATTCTATGTGATCTATAGTTTTTTCTTTGTGAGAAAGATCATAGCTCATGTAGTCACATTTACATTCTACTGTGTCATTTTGCCTGCAACTGTTTTAGTTCCAGAAGTAGAAGTTCCCAAATGGGGTGCTGTCTATATACCTTCCATCATCACACTTCTCAATGCTGTTGGAACACCAAGGTCATTCCACTTGATAATATTGTGGATACTTTTTGAAAATGTTATGTCAATGCATAGAACAAAGGCAACACTTATAGGTTTGTTTGAGGCAGGTAGAGTAAATGAATGGGTTGTTACCGAGAAATTAGGCGATGCTCTCAAAATAAAATCGGGCGGTAAAGCGGCTAGAAAGCCTCACATCAGGTTCAACGGAAGACTTCATTTCCTAGAACTTGGTGTGGGAGCTTACCTATTTTTGTGTGGATGCTATGATCTTGCCTTTGGGAAGAATCACTTCTTCATATATCTTTTTATGCAATCTATTGCCTTCTTTGTTGTGGGGGTTGGCTATGTTGGCATCTATGTTCCTAGTTCTTAA 1581 0.3865 MDKLSFEGVHYGIVSQMSFIWQQTRVPLVVPMLKILVFLCLAMSVMLFVERVYMGIVIVFLKLFGHKPEKHYKWEPLMDHDIELGNSCFPMVLVQIPMYNEKEVYQLSIGSACGLSWPSDRIIIQVLDDSTDPIIKNMVEVECERWRRKGLNIKYEIRENRNGYKAGALKEGMKHSYVKLCDYVAIFDADFQPESNFLWRTIPFLDQNPQVGLVQARWKFVNADECLMTRMQEMSLDYHFLVEQEVGSLTHAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYLSDLKVKSELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKKVTMWKKFYVIYSFFFVRKIIAHVVTFTFYCVILPATVLVPEVEVPKWGAVYIPSIITLLNAVGTPRSFHLIILWILFENVMSMHRTKATLIGLFEAGRVNEWVVTEKLGDALKIKSGGKAARKPHIRFNGRLHFLELGVGAYLFLCGCYDLAFGKNHFFIYLFMQSIAFFVVGVGYVGIYVPSS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4030 526 Pfam Glycosyltransferase like family 2 91 325 - -
Psa6g4030 526 PANTHER - 5 525 - -
Psa6g4030 526 PANTHER BNAC09G36340D PROTEIN 5 525 - -
Psa6g4030 526 SUPERFAMILY Nucleotide-diphospho-sugar transferases 89 368 IPR029044 -
Psa6g4030 526 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 83 309 IPR029044 -
Psa6g4030 526 CDD CESA_CaSu_A2 90 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4030 Psa-Chr6 351273801 351276724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4030 5 525 Miscellaneous Gene Families AT5G03760 75.862 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4030 K13680 - gmx:100797453 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0844 3 76568030 76573232 Psa6g4030 6 351273801 351276724 ECH
Psa6g1807 6 105072785 105074112 Psa6g4030 6 351273801 351276724 ECH
Psa6g4030 6 351273801 351276724 Psa6g4030 6 351273801 351276724 ECH