Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1807 ATGTCACTCGATTACCATTTTAAAGTGGAACAAGAAGTGAGCTCTTCAGCTTACGCCTTCTTTGGCTTCAACGGAACTGCAGGTGTATGGAGAATTTCAGCATTGAATGAAGCTGGCGGGTGGAAAGATAGGACCACAGTGGAAGATATGGATCTTTCTGTACGCGCAAGTCTCAAAGGATGGAAGTTCTTATACCTTTCCAATTTACAGGTTATAAACGAATTGCCAAGCACTTTAAAGGCCTTTAGATATCAACAACACCGATGGTCATGTGGTCCTGCCAATCTCTTCAGAAAAACCGCTATGGAGATTTTCGCAAGCAAGAATGTGTCTCTATGGAAGAAAATATATATTCTTTACAGTTTTTTCTTCGTTCGGAAGATTGTGGCACACGTCAACACATTTGTGTTCTATTGTATTGTGTTACCCGCAACCGTTGTGGTGCCTGAAGTTGTTGTCCCTAAATGGGGATCTGTTTATATTCCTTTCGTCATCACCCTTCTAAAATCCGTAGGAACACCAAGGTCATTCCATTTAGTGTCCTTTTGGATTCTCTTTGAAAATACGATGTCTCTCCATCGAACAAAGGCGACAATTATTGGTCTATTAGAGGCTAGTAGAGTGAATGAATGGGTTGTCACCGAAAAACTTGGAGCTACTCTCAAGGCTAAAGGTGGGGGTAAAGTATCCAAAAATATTCAACTTAAGATTGGAGACAGGATTGGAATGTCAGAACTTTGTGTTGGACTTTACCTCCTATTCTGCGGTTCATATGATGTTATGTATGGGAAAAATCAGTTCTTCGTATTCCTATACATCCAATCGATTGCTTTCTTCATCCTGGCGTTTGGATATGTTGGCACTGTTGTTCCCAACTCGTAG 882 0.4093 MSLDYHFKVEQEVSSSAYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLSVRASLKGWKFLYLSNLQVINELPSTLKAFRYQQHRWSCGPANLFRKTAMEIFASKNVSLWKKIYILYSFFFVRKIVAHVNTFVFYCIVLPATVVVPEVVVPKWGSVYIPFVITLLKSVGTPRSFHLVSFWILFENTMSLHRTKATIIGLLEASRVNEWVVTEKLGATLKAKGGGKVSKNIQLKIGDRIGMSELCVGLYLLFCGSYDVMYGKNQFFVFLYIQSIAFFILAFGYVGTVVPNS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1807 293 SUPERFAMILY Nucleotide-diphospho-sugar transferases 18 131 IPR029044 -
Psa6g1807 293 PANTHER - 1 292 - -
Psa6g1807 293 Pfam Glycosyl transferase family group 2 14 145 IPR001173 -
Psa6g1807 293 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 76 IPR029044 -
Psa6g1807 293 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1807 Psa-Chr6 105072785 105074112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1807 1 292 Miscellaneous Gene Families AT5G03760 73.379 2.31e-162 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1807 K13680 - gmx:100810016 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1807 6 105072785 105074112 Psa6g4030 6 351273801 351276724 ECH
Psa6g1807 6 105072785 105074112 Psa6g1807 6 105072785 105074112 ECH