Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g0844 ATGGATCGTTTTTCTTCTACTACTACTACTATCCCTTTTGCTTTTCATGGAGCTAAAGATGACATCACCATGCAATTCTCTTTGATTTGGACTCAAATCAAAGCACCATTGATAGTTCCATTATTGAGAATATCAGTGTTTTTGTGTTTGATAATGTCAGTGATGATGGTTATTGAGAGGGTTTATATGGGCATTGTCATTTCTCTTGTGAAACTATTTGGAAGAAAACCTGAAAAACGTTACAAATGGGAACCTATTAAGGATGATATTGAGTTGGGAAACTCTTGTTATCCAATGGTTCTTGTTCAAATCCCTATGTACAATGAAAGAGAGGTTTATCAATTGTCAATTGGAGCTGCATGTGGTCTCTCTTGGCCTTCTGATAGGATCATTATACAAGTTCTTGATGACTCCACTGATCCAACAATCAAGGAGTTGGTACAAGTAGAATGCCAAAGATGGGCAAACAAGGGTGTGAATATAAAGTATGAGGTTAGAGACAATAGAAATGGATACAAAGCAGGAGCACTAAAAGAAGGAATGAAACATAGCTATGTGAAACAATGTGATTTTGTTGCAATATTTGATGCTGATTTTCAACCAGAGTCTAATTTCTTATGGCGCACAGTGCCATTTTTGGTGCATAATTCTGAACTTGCCCTTATTCAAGCTCGTTGGAAATTTGTGAATGCAGATGAATGTTTAATGACCAGAATGCAAGAGATGTCACTAGATTACCATTTTACCGTTGAACAAGAAGTTGGCTCTTCCACTTATGCCTTTTTTGGCTTCAATGGGACTGCGGGAGTATGGAGAATTTCAGCTATGAATGAGGCTGGTGGATGGAAGGATAGAACCACAGTTGAAGACATGGACTTGGCAGTTCGAGCTAGTCTCAAAGGATGGAAATTCTTATACTTATCAAACTTGCAGGTGAAAAACGAATTGCCGAGTACTTTCAAAGCCTACCGTTACCAGCAGCATCGTTGGTCGTGTGGACCTGCAAATCTTTTCAGGAAAATGGTCATGGAGATTATCAAAAACAAGAAAGTATCGCTGTGGAAGAAGATACATGTAATTTACAACTTCTTCTTTGTTAGAAAAGTTGTAGCACACATCAATACGTTTGTGTTTTATTGCATTGTACTACCTGCGACAGTTTTGGTACCGGAAGTGGTGGTTCCGAAATGGGGTGCTGTTTATATCCCTTCGGTTATTACTCTTCTCAATGCTGTTGGAACTCCAAGGTCACTCCATTTACTCGTCTTTTGGATTCTTTTTGAGAATGTCATGTCGCTACATAGAACGAAAGCAACTATAGTTGGTCTATTGGAGACTAGTCGAGTGAATGAATGGATTGTCACTGAGAAGCTCGGAGACGCTCTCAAGGTTAAAGCAGGAACGAAAGCACTCAAGAAGCCTCGATTCAGAATTGAAGACAGGATTCACTTGTTAGAACTCGGTGTTGGAATGTACCTCTTCTTTATCGGCTGCTACGACGTTATGTTCGGGAAAAACCACTTCTTCATCTTTCTCTTTATCCAAGCATTAGCCTTCTTCATCATGGCATTTGGATATGTTGGAACCTTCATTCCCAACTCATAG 1605 0.3931 MDRFSSTTTTIPFAFHGAKDDITMQFSLIWTQIKAPLIVPLLRISVFLCLIMSVMMVIERVYMGIVISLVKLFGRKPEKRYKWEPIKDDIELGNSCYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQVECQRWANKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDFVAIFDADFQPESNFLWRTVPFLVHNSELALIQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLQVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIKNKKVSLWKKIHVIYNFFFVRKVVAHINTFVFYCIVLPATVLVPEVVVPKWGAVYIPSVITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIVGLLETSRVNEWIVTEKLGDALKVKAGTKALKKPRFRIEDRIHLLELGVGMYLFFIGCYDVMFGKNHFFIFLFIQALAFFIMAFGYVGTFIPNS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g0844 534 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 533 - -
Psa3g0844 534 PANTHER - 1 533 - -
Psa3g0844 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 374 IPR029044 -
Psa3g0844 534 Pfam Glycosyltransferase like family 2 99 333 - -
Psa3g0844 534 CDD CESA_CaSu_A2 98 334 - -
Psa3g0844 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 316 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g0844 Psa-Chr3 76568030 76573232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g0844 3 533 Miscellaneous Gene Families AT5G03760 80.639 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g0844 K13680 - gmx:100782772 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0844 3 76568030 76573232 Psa6g4030 6 351273801 351276724 ECH
Psa3g0844 3 76568030 76573232 Psa3g0844 3 76568030 76573232 ECH