Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0834 ATGCATATAGAAGCTCCAGAAAATTATGTAGCAGAAGACAAAAACTTCGACGATGATGGACGAACCAAGAGAACTGGGACATGGTTGACTGCAAGTGCACATATAATAACAGCTGTGATTGGTTCTGGAGTTCTATCACTTGCATGGGCAATAGCACAGATGGGTTGGGTGGCTGGTCCTGCAGTTCTCTTTGCTTTTTCTTTCATTACATATTTCACTTCAACTCTTCTCGCTGATTGTTACCGTTCACCTGATCCTGTTCATGGCAAGAGGAACTACACTTATTCTCAAGTTGTCCGAGCTAACTTAGGAGGCATGAAATATAAGCTGTGTGGATTGGCTCAGTATATAAACCTTATAGGTGTGACAATTGGCTACACAATAACTGCGTCAATTAGTATGGTGGCTGTGAAAAGATCAAACTGTTTTCACAAGCATGGACATCAAGACAAGTGTCATGTATCAAATAACTCTTTCATGATAATATTTGCCTGCATCCAAATTGTTCTATGCCAGATACCCAATTTCCATGAGCTCTCTTGGCTCTCAATTGTTGCAGCTGTTATGTCTTTTGCTTATTCTTCCATTGGCCTTGGCCTTTCCATAGCCAAAGTTGCAGGTGGGGGACATGTGAGGACAACCTTAACTGGGGTGGAAATTGGGGTAGATGTTACTGCAACAGAAAAGGTTTGGAGGATGTTCCAAGCTATTGGGGACATTGCCTTTGCTTATGCTTTTTCTAATGTGCTAATTGAAATCCAGGATACCTTGAAATCAAGTCCTCCAGAAAACAGAGTGATGAAGAGAGCAAGTTTAATTGGAATTTTGACAACAACATTATTCTATGTCCTCTGCGGAACCTTAGGTTATGCCGCATTTGGAAATGATGCACCGGGAAATTTCCTCACAGGTTTCGGCTTCTACGAGCCCTTCTGGCTAATAGACATTGCCAATGTTTGCATAGCAATTCACTTAATTGGAGCATACCAAGTCTTTGTCCAACCCATATTCGGGTTTGTCGAGGGCCAAAGCAAAGATAAATGGCCAGAAAGCAAATTTGTGAATGGAGAACATGCCATGAACATTCCATTCTATGGAAGCTTCAACGTGAATTTCTTCAGAGTATTATGGAGGACTGCATATGTGATTATCACCGCAATCGTAGCAATGTTATTTCCATTCTTCAATGATTTCTTGGGACTAATTGGTTCACTATCCTTTTATCCATTGACTGTTTACTTCCCTATAGAAATGTACATCAAGAAAACCAAGATGCAAAGGTTTTCATTCACATGGACTTGGCTCAAGATATTGAGTTGGGCTTGTTTGATCATTTCTATTATCTCAGCTGCTGGATCCATTCAAGGACTTGCTCAATCTCTCAAGACATATAAACCTTTCAGAGGAGAACAATGA 1416 0.4061 MHIEAPENYVAEDKNFDDDGRTKRTGTWLTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPVHGKRNYTYSQVVRANLGGMKYKLCGLAQYINLIGVTIGYTITASISMVAVKRSNCFHKHGHQDKCHVSNNSFMIIFACIQIVLCQIPNFHELSWLSIVAAVMSFAYSSIGLGLSIAKVAGGGHVRTTLTGVEIGVDVTATEKVWRMFQAIGDIAFAYAFSNVLIEIQDTLKSSPPENRVMKRASLIGILTTTLFYVLCGTLGYAAFGNDAPGNFLTGFGFYEPFWLIDIANVCIAIHLIGAYQVFVQPIFGFVEGQSKDKWPESKFVNGEHAMNIPFYGSFNVNFFRVLWRTAYVIITAIVAMLFPFFNDFLGLIGSLSFYPLTVYFPIEMYIKKTKMQRFSFTWTWLKILSWACLIISIISAAGSIQGLAQSLKTYKPFRGEQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0834 471 Pfam Transmembrane amino acid transporter protein 24 457 IPR013057 -
Psa6g0834 471 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 465 - -
Psa6g0834 471 Gene3D Amino acid/polyamine transporter I 21 461 - -
Psa6g0834 471 PANTHER OS05G0424000 PROTEIN-RELATED 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0834 Psa-Chr6 29362224 29365410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0834 6 468 Organic Solute Cotransporters AT5G49630 75.536 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0834 K24917 - gmx:100806335 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0834 6 29362224 29365410 Psa5g1385 5 107759831 107766830 PCT
Psa5g1384 5 107737526 107740160 Psa6g0834 6 29362224 29365410 PCT