Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1385 ATGGTAGAAAACATTTCCAGAACAAACCTTAGCTACCGTGGAGATACTGATGGCATCGAGGACGCCATAGATGGCGCATCTTTACACACTGACTCCAAATGCTATGACGACGATGGCCGTGTTAAACGAACAGGAACTGTTTGGACTACATGCTCCCACATAATAACAGGTGTGATAGGATCTGGAGTGCTCTCCTTAGCCTGGTCCATAGCTCAGATGGGTTGGATTGCTGGTCCTGCAGCCATGGTCTTTTTCAGTATCATCACTCTGTATACTTCATCATTTCTCGCTGATTGTTATCGTTGTGGCAACAGTGAATTTGGAAAGAGAAACTATACTTTCATGGATGCAGTTCACAATATTCTTGGTGGTCCCAGTGTTAAGATTTGTGGGATAGTTCAGTACTTGAATCTTTTCGGAAGTGCAATAGGATACAATATTGCGGCTGCCATGAGCATGATGGAAATCAGAAAGTCTTACTGTATCCATTCCTCTCATGGAGAAGACTCATGTCACATTTCGGGCAACCCATATATGATAGCTTTTGGTGTGGCACAACTTTTCTTTTCTCAAATTCCAGATTTTCATAACACGTGGTGGCTCTCAATAGTTGCAGCAGCTATGTCATTCTTCTATTCTACAATTTGTCTCGCTCTTGGAATTTCAAAAGTTGCAGAAACGGGTACGATCATGGGTAGCCTCACAGGAATAAGCATCGGGACAGTGACCCCGGCCCAAAAAGTATGGGGGGTTTTCCAAGGTCTTGGAAATATCGCCTTTGCCTATTCATATTCTTTCATTCTCCTGGAAATTCAGGACACCATCAAATCTCCACCATCGGAAGGAAAGGCAATGAAGAAGGCTGCAAAGCTAAGTATTGCAATAACCACAACATTTTATTTGCTCTGTGGCTGCATGGGCTATGCTGCTTTTGGAGACGCAGTACCAGGTAACCTGCTCGCTGGATTTGGTGTCTCGAAAGCATATATTATTGTAGATATGGCTAATGCTGCTATTGTAGTTCACCTTTTCGGAGCATACCAAGTGTATGCCCAACCCCTCTTTGCCTTCATTGAGAAAGAGGCAGGAAAAAAATGGCCCAAAATTGACAAAGGATTCAAAGTTAAAATTCCCGGTTTGCCAGTCTACAATCAAAACATATTTATGTTAATTTGGCGGACAATTTTTGTTATCATCGCCACATTGATTGCAATGCTGATTCCTTTTTTCAATGACGTTTTGGGAGTGATTGGAGCATTGGGATTTTGGCCTTTAACTGTTTACTTTCCTGTGGAGATGTATATCATACAGAAGAGGATCCCAAAATGGAGTAGCAAATGGATTTATCTGCAAATAACGAGTATTTTCTGCCTCATAGTATCTATTGTGGCTGGTCTTGGCTCATTGGTTGGGGTCTGGATTGACCTGCAGAAATACAAACCATTCAGCTTAAAGAATTGA 1461 0.4209 MVENISRTNLSYRGDTDGIEDAIDGASLHTDSKCYDDDGRVKRTGTVWTTCSHIITGVIGSGVLSLAWSIAQMGWIAGPAAMVFFSIITLYTSSFLADCYRCGNSEFGKRNYTFMDAVHNILGGPSVKICGIVQYLNLFGSAIGYNIAAAMSMMEIRKSYCIHSSHGEDSCHISGNPYMIAFGVAQLFFSQIPDFHNTWWLSIVAAAMSFFYSTICLALGISKVAETGTIMGSLTGISIGTVTPAQKVWGVFQGLGNIAFAYSYSFILLEIQDTIKSPPSEGKAMKKAAKLSIAITTTFYLLCGCMGYAAFGDAVPGNLLAGFGVSKAYIIVDMANAAIVVHLFGAYQVYAQPLFAFIEKEAGKKWPKIDKGFKVKIPGLPVYNQNIFMLIWRTIFVIIATLIAMLIPFFNDVLGVIGALGFWPLTVYFPVEMYIIQKRIPKWSSKWIYLQITSIFCLIVSIVAGLGSLVGVWIDLQKYKPFSLKN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1385 486 Pfam Transmembrane amino acid transporter protein 43 472 IPR013057 -
Psa5g1385 486 PANTHER OS05G0424000 PROTEIN-RELATED 5 480 - -
Psa5g1385 486 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 5 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1385 Psa-Chr5 107759831 107766830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1385 33 482 Organic Solute Cotransporters AT5G09220 64.537 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1385 K24917 - gmx:100817699 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1385 5 107759831 107766830 Psa5g1385 5 107759831 107766830 ECH
Psa7g1040 7 77845329 77847698 Psa5g1385 5 107759831 107766830 ECH
Psa6g0834 6 29362224 29365410 Psa5g1385 5 107759831 107766830 PCT