Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1384 ATGGAAGCTCACCCTTTACAACCTAATTTTGAATACTTGGACGATGATGGCCGTCCTAGAAGAACAGGAACCATTTGGACATCAAGCTCTCATATAATAACAGCTGTGATTGGATCTGGAGTACTGTCATTGGCATGGGCTATAGCACAATTGGGTTGGATTGCTGGTCCTACGGTGATGATCCTTTTCAGCCTCATCACTTTGTATACTTCATGGATGCTAACTGAATGTTATCGTTCTGGTGATCCTCTTTTTGGGAAGAGAAACTATACTTACGTCGATGCAGTTCAAAACATTCTTGGCAGGTACCATTACACAGTTTGTGCATTAATTCAGTACATATGTCTTTGCTGCAGTGCAACAGGATATTCAATTGCAGCTGCTATTAGCATGATGGAAATAAAAAAGACCAGATGCCTTCATAAATCGGGAGGAAAAGATCCATGTAGGATTTCAAGCAATCCATACATGATCGGTTTTGGAGTGATTCAAATTTTCGCTTCTCAAATTCCTGAGTTTCATGAAACATGGTTGCTTTCAGTAGTGGCAGCAATCATGTCTTTCGTCTATTCCATAATCGGCTGCTTTCTCGCAATTTACCAAGTTGCAGTAAACGGTACATTCAAGGGTACTGTAACCGGAGGAAGCAGTGGAAATGTGTCATCAACAGAAAAACTATGGGGAATTTTCCAAGCTCTTGGTAACATAGCCTTTGCTTATTCATATTCTCAAATTCTCATCGAAATTCAGGACACCATAAAAAATCCACCATCTGAAGTAAAAACAATGAGTAAGGCAACTACCTTAAGTACTATTGTGACTACAGCATTTTACATGCTTTGTGGCTGCATGGGCTATGCTGCATTTGGAGAACAAGCACCAGGGAACTTGCTCACTGGATTTAGTTCGTACAATCCATCATGGGTCATTGATTTAGCGAATGCGACCATCGTGATTCACCTTGTTGGAACATACCAAGTATATGCTCAACCTGTCTATGCCTTTGTAGAGAAATGGGCAGCAAAAAGATGGCCTAAAACAAAAGTGAATTTCAGAGTTTTTGGTGGTTACAATCTCAATCTATTTAGATTAGTTTGGAGAACATTATTTGTGATCATAGCTACTTTTGTTGCAATGGTGATTCCTTTTTTCAATGATGTTCTGGGATTTATTGGAGCAATTGGGTTTTGGCCGTTAACGGTTTATTATCCGGTGGAGATGTATATCTTGCAGAAGAAGGTTCCAAAATGGAGTAGGAAATGGATTTGGTTAAAAATCATAAGTCTTGTATGCTTTATTGTATCAGTTTTTGCTGCTCTTGGCTCAATTGCTAGCATTGTGGTTGACCTAAAGAAATACAGGCCATTCGTCACAGATTATTGA 1383 0.3933 MEAHPLQPNFEYLDDDGRPRRTGTIWTSSSHIITAVIGSGVLSLAWAIAQLGWIAGPTVMILFSLITLYTSWMLTECYRSGDPLFGKRNYTYVDAVQNILGRYHYTVCALIQYICLCCSATGYSIAAAISMMEIKKTRCLHKSGGKDPCRISSNPYMIGFGVIQIFASQIPEFHETWLLSVVAAIMSFVYSIIGCFLAIYQVAVNGTFKGTVTGGSSGNVSSTEKLWGIFQALGNIAFAYSYSQILIEIQDTIKNPPSEVKTMSKATTLSTIVTTAFYMLCGCMGYAAFGEQAPGNLLTGFSSYNPSWVIDLANATIVIHLVGTYQVYAQPVYAFVEKWAAKRWPKTKVNFRVFGGYNLNLFRLVWRTLFVIIATFVAMVIPFFNDVLGFIGAIGFWPLTVYYPVEMYILQKKVPKWSRKWIWLKIISLVCFIVSVFAALGSIASIVVDLKKYRPFVTDY* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1384 460 Pfam Transmembrane amino acid transporter protein 21 446 IPR013057 -
Psa5g1384 460 PANTHER OS05G0424000 PROTEIN-RELATED 7 454 - -
Psa5g1384 460 Gene3D Amino acid/polyamine transporter I 19 452 - -
Psa5g1384 460 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 7 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1384 Psa-Chr5 107737526 107740160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1384 5 460 Organic Solute Cotransporters AT5G09220 61.638 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1384 K24917 - gmx:100816507 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1384 5 107737526 107740160 Psa5g1384 5 107737526 107740160 ECH
Psa5g1384 5 107737526 107740160 Psa6g0834 6 29362224 29365410 PCT