Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6616 ATGAGTAGCATTAAGTTTCTCCAAGCTATAACCGTTACAGTACTGATATTAACATTATCACTCACCGCCACCGTCCAGTCATGTCCACCGTCAGACAGGGCGGCGCTACTAGCCTTCAGAGCAGCTCTCCATGATCCCTACCTCGGCATCTTCAACTCATGGACCGGCACCGACTGTTGCCACAAATGGTACGGTGTCAGCTGCGACAGAGGCTCCCGCCGCGTCGCCGATATCAACCTCCGCGGCGAGTCAGAAGATCCAATCTTCGAAAAAGCACACCGCACCGGCTTCATGACCGGTTACATCTCACCAGCAATCTGCAAACTCAACCGCCTCTCAAGCATAACCGTCGCCGACTGGAAAAACATCTCCGGCGAAATCCCCCGCTGTATAACCTCCCTTCCTTTCCTCCGCATCATCGACCTAATCGGAAACCGTATCTCCGGTCCTATCCCCTATAACATCGGCAAACTCCAGCGTCTCACCGTTTTAAACATCGCCGACAACTCCATCTCCGGTTACCTCCCACCGTCGCTAACCAACCTCAGAAGCCTAATGCACCTCGACATCCGTAACAACCAGATCTCCGGGCCCATACCTAACGACATCGGCAGGCTTCCAATGCTGAGCCGGGCTTTACTTAGCGGTAACAAAATCAGCGGGCCCATACCCGAATCAATTTCTCGTATTTACCGTCTCGCAGATCTAGATCTATCTCGTAACCAAGTTTCCGGGCCCATACCCGAATCACTAGGTAAAATGGCGGTTTTATCCACGCTTAATTTAGATATGAATCATATCTCTGGTCCTATTCCAATAACTCTTTTTAACTCAGGAATAAGTGATTTAAATTTAAGCCGAAACAGTTTGGAAGGTAATATACCTGATGTGTTTGGTGTGAGATCTTATTTCACGGTTTTGGATTTGTCTTATAATAGACTTAAAGGGAGTATTCCAAAATCTATGGCTTCTGCTTCTTATATTGGACATTTGGATTTGAGTTATAATCATCTTTGTGGTAAGATTCCTGATGGAGTTCCTTTTGATCATTTGGAGGCTTCATCTTTTGTGTACAATGATTGTCTTTGTGGGAAGCCACTTAAAGCTTGTGTTAATTAA 1119 0.4665 MSSIKFLQAITVTVLILTLSLTATVQSCPPSDRAALLAFRAALHDPYLGIFNSWTGTDCCHKWYGVSCDRGSRRVADINLRGESEDPIFEKAHRTGFMTGYISPAICKLNRLSSITVADWKNISGEIPRCITSLPFLRIIDLIGNRISGPIPYNIGKLQRLTVLNIADNSISGYLPPSLTNLRSLMHLDIRNNQISGPIPNDIGRLPMLSRALLSGNKISGPIPESISRIYRLADLDLSRNQVSGPIPESLGKMAVLSTLNLDMNHISGPIPITLFNSGISDLNLSRNSLEGNIPDVFGVRSYFTVLDLSYNRLKGSIPKSMASASYIGHLDLSYNHLCGKIPDGVPFDHLEASSFVYNDCLCGKPLKACVN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6616 372 Gene3D Ribonuclease Inhibitor 25 95 IPR032675 -
Psa5g6616 372 Gene3D Ribonuclease Inhibitor 96 372 IPR032675 -
Psa5g6616 372 SUPERFAMILY L domain-like 27 368 - -
Psa5g6616 372 Pfam Leucine rich repeat 137 195 IPR001611 GO:0005515
Psa5g6616 372 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 9 370 - -
Psa5g6616 372 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Psa5g6616 372 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 370 - -
Psa5g6616 372 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6616 Psa-Chr5 554074002 554076481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6616 93 371 Receptor kinase-like Gene Family AT5G46330 37.193 8.93e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6616 - - gmx:100804739 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6616 5 554074002 554076481 Psa5g6616 5 554074002 554076481 ECH
Psa5g6616 5 554074002 554076481 Psa7g4887 7 426908513 426910607 ECH
Psa5g6616 5 554074002 554076481 Psa7g4886 7 426893416 426894552 PCT