Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4886 ATGTGTGGTGCTAGAAATATTTTAGCAATGTCATTAGTACTAGTGGCCTTACAAGTTCTCAGTGTCTCATCATGTCCTCCTTCTGAATGGGCAGCACTCATGTCCTTCAAAGCATCTCTCAATGAACCTTCCTTTGGAATCTTCCATTCATGGAGAGGTACCAACTGTTGCTACAATTGGTACGGCATCAGCTGCGACCCGACCACACGTCGCGTCGCAGAGATCACACTCCGCGGCCTCACCGTGGGAGACAACCATCGCCGCTACAAACACATCAAAACCACAAGTGGATACATGACTGGACACATCTCTCCATCAATTTGCAACCTCGCACAGCTCTCTGCCATTACCATCTCCGACTGGAAGGGTATTTCGGGAAATATCCCTGAATGCATTACAACGCTAAATTTTCTCCAAATTATAGATTTCTCCGGAAACATGATTTCCGGAAAGATTCCATATAATATAGGGCATCTTACTCAGCTTATGATGCTCAACCTCGCAGACAATCATATCTCAAAAAGGATTCCTGATACACTTGTAAACCTCTTTAACTTAATGCAACTCGATCTTCGCAACAATGCCATAGAAGGCCCCATTCCCGGGAACATCGGCCGGCTCAAAAAGTTGAACCGGGCGTTACTAAGTCACAATAGAATAAAGGGTCGAATTCCACGGTCTTTTTCAAATATTTACGGGCTAGCAGACTTAGACCTGTCATTGAACCAGTTATCCGGTCCAATTCCGTATTCATTAGGACAAATGTCGGTTCTGGACTCGCTGAACCTGAAGTATAACAACTTGACCGGGAGGATTCCGAGGACTTTGTTGGCTTCTAGAATGAGCCATTTGGATTTAAGTAGAAATTCTTTGACAGGACCTATACCAGATGTGTTTAGTGAAATCTCATATTTCATAAACATTGATTTGTCGCATAACAATTTGAACGGTTTGATTCCTAAGTCAATGGTGTTAGCCACTTACATTGGCCACGTCGACTTTAGTCACAACCACCTCTATGGAAGGATTCTGGTTGCTTCTTCCTTAAGCCATCTTCAGCCGGAATCGTTCCGACACAATGGACGGCAAGCCACTTCAACCATGCACTCAGTCGCATACACAAACATGAATAAATAG 1137 0.4398 MCGARNILAMSLVLVALQVLSVSSCPPSEWAALMSFKASLNEPSFGIFHSWRGTNCCYNWYGISCDPTTRRVAEITLRGLTVGDNHRRYKHIKTTSGYMTGHISPSICNLAQLSAITISDWKGISGNIPECITTLNFLQIIDFSGNMISGKIPYNIGHLTQLMMLNLADNHISKRIPDTLVNLFNLMQLDLRNNAIEGPIPGNIGRLKKLNRALLSHNRIKGRIPRSFSNIYGLADLDLSLNQLSGPIPYSLGQMSVLDSLNLKYNNLTGRIPRTLLASRMSHLDLSRNSLTGPIPDVFSEISYFINIDLSHNNLNGLIPKSMVLATYIGHVDFSHNHLYGRILVASSLSHLQPESFRHNGRQATSTMHSVAYTNMNK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4886 378 Pfam Leucine rich repeat 214 268 IPR001611 GO:0005515
Psa7g4886 378 Gene3D Ribonuclease Inhibitor 204 279 IPR032675 -
Psa7g4886 378 SUPERFAMILY L domain-like 24 341 - -
Psa7g4886 378 Gene3D Ribonuclease Inhibitor 281 360 IPR032675 -
Psa7g4886 378 Gene3D Ribonuclease Inhibitor 27 203 IPR032675 -
Psa7g4886 378 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 2 362 IPR045273 -
Psa7g4886 378 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 362 - -
Psa7g4886 378 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Psa7g4886 378 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4886 Psa-Chr7 426893416 426894552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4886 120 343 Receptor kinase-like Gene Family AT3G11080 33.921 4.87e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4886 - - lja:Lj3g3v3246320.1 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6616 5 554074002 554076481 Psa7g4886 7 426893416 426894552 PCT