Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4887 ATGCAAATACTCTACTTCACCCCTATAACGGCAGTCTTACTCTTCGCCGCCGTTATCTCCACCGTCAACTCATGCCTTCCATCTGAACTAGCAGCTCTACAAGCCTTCAAGTCATCACTCCGTGAACCTTACGTCGGTCTATTCAACTCATGGACCGGAACCGACTGCTGCCACAACTGGTTCGGCGTCTCCTGCGACCAGAACTCTCGTCGCGTCTCCGACATAAACCTCCGCGCCGGTACTCTCTACACAACCTTCGAAAAAGCACACCGTCCTGGTTACATGACGGGTTACATCTCACCGGAGATTTGTAAACTGACTCAAATCTCCAGCATTACTATCACCGATTGGAAGGGTATCTCCGGCGAGATCCCGGCTTGCATTTCCTCACTCTCTTCCCTTCGAATCATCGACCTCGCCGGAAACCGTTTCTCCGGAAACATCCCAACCGACATCGGAAAACTCCTCCATCTCAACCGTTTAAGCCTCGCCGACAACTTATTCACGGGCGGAATCCCGAGTTCGTTGATCAGTATAACCAGTTTGACTCATCTTGACATCCGTAATAACCGGATCTCGGGAATCATCCCAACGGGCTTCGGCACACTTCAGAATTTGAACCAGGCTTTATTAAGCGGCAATCAGTTTCACGGGCCTATCCCGGGCTCAATTTCTCAAATCAACCGTCTTTCAGATCTGGATCTATCTCAAAACCAACTAAATGGGTCCATTCCGGACTCATTGGGCTTAATGTCTTCATTGGGGACACTAAAGCTTGATACGAACAAGCTTTCCGGAATGATTCCGAAGAGTCTTTTGAGTTCAGGAATCAGTGACTTGAATTTGAGTCATAACATGTTGGAGGGAAATATACCTGATTTTGGTGTTAGGTCCTATTTTACATCGTTGGATTTCTCCTATAATAACCTCATGGGTGCTATACCTAAATCTATAGCTTCTCCTTCTTACATTGGTTACATGGATTTGAGCCATAACCATCTATGTGGTCCAATTCCTAATGCTATAGATTATTTTGATGCGACCTCCTTTGAGTACAATGAGTGCCTTTGTGGAAAGCCACTTAATGTCTGCAAAACAAAGGGGTAA 1107 0.4643 MQILYFTPITAVLLFAAVISTVNSCLPSELAALQAFKSSLREPYVGLFNSWTGTDCCHNWFGVSCDQNSRRVSDINLRAGTLYTTFEKAHRPGYMTGYISPEICKLTQISSITITDWKGISGEIPACISSLSSLRIIDLAGNRFSGNIPTDIGKLLHLNRLSLADNLFTGGIPSSLISITSLTHLDIRNNRISGIIPTGFGTLQNLNQALLSGNQFHGPIPGSISQINRLSDLDLSQNQLNGSIPDSLGLMSSLGTLKLDTNKLSGMIPKSLLSSGISDLNLSHNMLEGNIPDFGVRSYFTSLDFSYNNLMGAIPKSIASPSYIGYMDLSHNHLCGPIPNAIDYFDATSFEYNECLCGKPLNVCKTKG* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4887 368 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 7 367 - -
Psa7g4887 368 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 367 - -
Psa7g4887 368 Gene3D Ribonuclease Inhibitor 93 368 IPR032675 -
Psa7g4887 368 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Psa7g4887 368 ProSiteProfiles Leucine-rich repeat profile. 229 251 IPR001611 GO:0005515
Psa7g4887 368 Gene3D Ribonuclease Inhibitor 23 91 IPR032675 -
Psa7g4887 368 SUPERFAMILY L domain-like 24 362 - -
Psa7g4887 368 Pfam Leucine rich repeat 181 240 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4887 Psa-Chr7 426908513 426910607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4887 95 367 Receptor kinase-like Gene Family AT3G11080 30.960 2.77e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4887 - - lja:Lj3g3v3246330.1 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4887 7 426908513 426910607 Psa7g4887 7 426908513 426910607 ECH
Psa5g6616 5 554074002 554076481 Psa7g4887 7 426908513 426910607 ECH