Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2995 ATGGCTTCCAAACAGAAACAAACTTACAGCGTTTGTTTTTGCTGCCGGCGCCGATTTAAGCTCGGCATATCGGAAGCACCGCCGCAGATAAGAGAACTTTATCACAATTACTCCGATGAGAGCGCCATCATGACTGCATCTCACCTACAAAGGTTCCTCATTGAGGTGCAGGGAGATGAGAACATCACAGAGAATGAAGCACAATCCATCATCGACGGTCATAAACATTTGAGTATCTTTCATAGAAGAGGTCTCAATCTCGAAAGTTTCTTCAAGTTTCTCTTCAGTGATAACAACGCTCCCCTCTTAGCTTCTCGCGGGGTGCATCAAGTTATGAGTTTACCGTTGTCTCATTATTACATACACACCGGTCATAATTCCTATCTTACTGGAAATCAGCTTAGTAGTGACTGCAGTGATGCCCCTATCATCGTTGCACTTCAGAGAGGGGTAAGGGTTATTGAATTGGATATATGGCCTAATGGATCCAAGGATGATATTGAAGTTCTTCATGGAAGGACATTGACTACTCCTGTGGCGCTTATCAAATGTTTGAGGTCTATTAAGGAGTATGCGTTCGTTGCGTCGGAATATCCGGTTGTAATAACGTTAGAAGACCACCTTACTCCTGATCTTCAAGCCAAAGTGGCCCAGATGGTTACTCAAACATTTGGAGACATACTATTTTGTCCTAGCTCGGAAAGCTTGAAGGAATTTCCTTCCCCCGACTCACTCAAAAGGAGGATTATCATATCAACAAAACCACCTAAAGAGTACCTTGAGGCAAAAGAGGTACAGGAAAAGGAGGAATTGACGAAGGGAAAGTCTTCAGGTGATGAAGAAGCTTGGGGCAAAGAAGTCCCTAGTTTGAGAGGCGGTACCATATCTGATTACAAGCAGAACAATGACGACGACGATGAAGATGATCTTAATGAGGAGGAAGATTCTGAAGAAGCAGAAAAGTCACGCCAAAATGGATCCGGTGAATATAGACGTTTAATTGCAATTCATGCTGGGAAACCTAAAGGTGGATTAGTGGAAGGTCTCAAAGTGGATCCCGATAAAGTGAGACGTCTAAGTTTAAGTGAGTCACAGCTCGAAAAGGCGGCTGAAACATATGGAAAAGAAATTGTCAGGTTTACTCAGAGGAATATACTGAGAGTGTATCCGAAAGGTACTCGCATTACCTCGTCAAATTATAATCCATTAATTGGGTGGATGCACGGAGCTCAGATGGTTGCGTTTAACATGCAGGGGTATGGAAGATCTCTTTGGTTGATGCAAGGAATGTTCAAAGCCAATGGAGGCTGTGGTTTTGTTAAAAAACCAGATTTTCTATTAAAAACTGGTCCCAATAATGAGGTTTTTGATCCTAAAGCTTCTTTGCCATTGAAAACTACTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTATTATGATTTTGACCATACACACTTTGATCAATTCTCACCTCCAGACTTCTATGCAAGGGTGGGGATTGCTGGAGTCCCTTTTGATACTATTATGAAAAAAACTAAAACAGTAGAGGATAGTTGGTTGCCTTCTTGGAATGAGGTATTCGAGTTCCCACTTTCGGTTCCGGAGTTGGCGCTGCTTCGGATAGAAGTTCATGAGTATGACATGTCTGAGAAGGATGACTTTGGTGGGCAAACATGCTTACCTGTGTGGGAACTAAGAAGTGGAATTCGAGCAGTTCCGTTACATTCCCGCAAAGGAGATAAATACAACAATGTAAAGCTTCTCATGCGCTTTGAGTTCATCTGA 1788 0.4256 MASKQKQTYSVCFCCRRRFKLGISEAPPQIRELYHNYSDESAIMTASHLQRFLIEVQGDENITENEAQSIIDGHKHLSIFHRRGLNLESFFKFLFSDNNAPLLASRGVHQVMSLPLSHYYIHTGHNSYLTGNQLSSDCSDAPIIVALQRGVRVIELDIWPNGSKDDIEVLHGRTLTTPVALIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAQMVTQTFGDILFCPSSESLKEFPSPDSLKRRIIISTKPPKEYLEAKEVQEKEELTKGKSSGDEEAWGKEVPSLRGGTISDYKQNNDDDDEDDLNEEEDSEEAEKSRQNGSGEYRRLIAIHAGKPKGGLVEGLKVDPDKVRRLSLSESQLEKAAETYGKEIVRFTQRNILRVYPKGTRITSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGFVKKPDFLLKTGPNNEVFDPKASLPLKTTLKVTVYMGEGWYYDFDHTHFDQFSPPDFYARVGIAGVPFDTIMKKTKTVEDSWLPSWNEVFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVWELRSGIRAVPLHSRKGDKYNNVKLLMRFEFI* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2995 595 Pfam Phosphatidylinositol-specific phospholipase C, X domain 112 254 IPR000909 -
Psa5g2995 595 SMART C2_3c 467 575 IPR000008 -
Psa5g2995 595 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 110 254 - -
Psa5g2995 595 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 360 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa5g2995 595 ProSiteProfiles C2 domain profile. 448 577 IPR000008 -
Psa5g2995 595 MobiDBLite consensus disorder prediction 301 316 - -
Psa5g2995 595 PRINTS Phospholipase C signature 115 133 IPR001192 GO:0035556
Psa5g2995 595 PRINTS Phospholipase C signature 141 161 IPR001192 GO:0035556
Psa5g2995 595 PRINTS Phospholipase C signature 238 255 IPR001192 GO:0035556
Psa5g2995 595 PRINTS Phospholipase C signature 385 406 IPR001192 GO:0035556
Psa5g2995 595 PRINTS Phospholipase C signature 406 424 IPR001192 GO:0035556
Psa5g2995 595 PRINTS Phospholipase C signature 561 571 IPR001192 GO:0035556
Psa5g2995 595 CDD PI-PLCc_plant 109 434 - -
Psa5g2995 595 Gene3D C2 domain 463 595 IPR035892 -
Psa5g2995 595 Pfam C2 domain 468 568 IPR000008 -
Psa5g2995 595 SUPERFAMILY PLC-like phosphodiesterases 112 448 IPR017946 GO:0006629|GO:0008081
Psa5g2995 595 MobiDBLite consensus disorder prediction 261 331 - -
Psa5g2995 595 CDD C2_PLC_like 465 594 - -
Psa5g2995 595 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 5 595 IPR001192 GO:0035556
Psa5g2995 595 SMART plcy_3 330 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa5g2995 595 MobiDBLite consensus disorder prediction 261 286 - -
Psa5g2995 595 Gene3D - 25 102 - -
Psa5g2995 595 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa5g2995 595 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 467 594 IPR035892 -
Psa5g2995 595 SMART plcx_3 110 254 IPR000909 -
Psa5g2995 595 SUPERFAMILY EF-hand 27 103 IPR011992 -
Psa5g2995 595 Pfam Phosphoinositide-specific phospholipase C, efhand-like 29 97 IPR015359 -
Psa5g2995 595 Gene3D Phosphatidylinositol (PI) phosphodiesterase 106 460 IPR017946 GO:0006629|GO:0008081
Psa5g2995 595 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 5 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2995 Psa-Chr5 230503201 230506882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2995 6 595 Acyl Lipid Metabolism Gene Families AT3G55940 67.230 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2995 K05857 - gmx:100784534 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2995 5 230503201 230506882 Psa2g0774 2 47291095 47294920 ECH
Psa5g2995 5 230503201 230506882 Psa5g2995 5 230503201 230506882 ECH
Psa5g2995 5 230503201 230506882 Psa2g0776 2 47350505 47353745 PCT