Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0774 ATGGCCACATTCACATACAACTACAAAATGTTCAAATGCTTCAAAAGAAAATACGCTATCACAGAGCAAGCACCGCCGTCCGACGTCAAACAAGTGTTTTCTGAATTCTCCGATGGCGGTTCGTTCATCTCCGCCAAACAGCTCCAACGGTTTTTTCTTGAACACCAAGGCGAAACGGATTGCACCGAAGATGATTCGAAAAAGATCGTTGAAAATGCTCTGCAGTCGCGGAAAGGCAATCAGGATATCAGTGGCGGAGGTGATGGCGTTTCCGGTACCGGAGAGGGACTCTCGGTTGAAGAATTCTTTCAGTTTTTGTCATTTGATGAATTCAATGGTCCTCTGAAATCACAGGTACATCATGATATGAATGCTCCTTTGTCACATTATTTCATATACACAGGACACAATTCCTATCTAACTGGGAATCAGCTAAGCAGCGATTGCAGTGATGTGCCAATCATAAAGGCGTTGCAACTAGGCGTCCGAGTAATTGAACTAGATATATGGCCAAATTCAACTAAGGACGACATCGATGTAGTTCATGGAAGGACACTTACCACTCCTGTCTCACTTCTTCAATGTTTGAAGTCCATAAAAGAATACGCATTCGTTAAATCTCGTTACCCTATCATTATAACTTTAGAAGATCATCTTACTCCAGATCTTCAAGCTAAAGTTGCAGAGATGACAACTCAAACATTTGGAGATATGCTGTATTTTCCTCAGACAGAACCTATGACAGAATTCCCCTCACCAGAATCCCTAAAAGATCGAATTCTTATATCGACGAAACCACCAAAGGAATATCTTGATACTAGACAATTTAAGGATACCAGTGACAGTGAAAAGGAATTTAGTGAAGAAGGATCTGTGTCACCTGCCCTTAGTGCTGAAGCTGATGACAAATTTAATGGAAGCGATGTTGATGATGAATGTTTCAATCCTCGTGATAGAAAACCAGACCAACAGAGTGCACCAGAGTACAAACGTTTGATTACAATCCATGCTGGTAAACCCAAGGGTCAAATAAGGGATCATCTAATAGTGGCTGGTAATGTTAAGCGCTTGAGCTTGAGTGAGCAGGAACTCGAAAAAGCTTCTGTGTCTTATGGAGCTGATATTGTTAGGTTTACACAGAAGAATATTATTCGAGTATATCCAAAGGGAACGCGTGTCACCTCGTCAAATTACAGGCCACATATAGGATGGATGTATGGTGCTCAGATGGTAGCACTTAACATGCAGGGGCATGGAAAATCACTCTGGTATATGCAAGGGATGTTTAGCGCAAATGGAGGGTGTGGTTATGTGAAAAAACCTGAGTTTCTTTTGGCAAAAGTTCCGCGCAATGAGTGTTTTGATCCAAAAAGAACTCTGCCAGCAAAGAAGACATTGAAGGTGAAAGTGTATTTGGGACATGGGTGGAGCACAGATTTTAGCAAAACACACTTTGATACATTCTCTCCTCCGGACTTTTACACAAAGATTTGTATAGTTGGAGTACCAGCTGATAAAATCCATAAGAAGACCAAAATAATTCACGACGATTGGTTTCCGGTTTGGGATGAAGAGTTTGATTTTCCTTTGAGTGTTCCAGAGCTTGCTTTGCTTAGTATAGAAGTAAGAGAGTATGATAAGCATGAAAAAGATGATTTTGGTGGACAAATATGTTTGCCAGTTCCTGAGCTAAAATCTGGATTCAGAGCAGTCCCTCTATATGATCAGAAGGGCGAAAAGTTAAAATCTGTAAAGCTTTTGATGCGGTTTCAGTTTACATGA 1782 0.4091 MATFTYNYKMFKCFKRKYAITEQAPPSDVKQVFSEFSDGGSFISAKQLQRFFLEHQGETDCTEDDSKKIVENALQSRKGNQDISGGGDGVSGTGEGLSVEEFFQFLSFDEFNGPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQLGVRVIELDIWPNSTKDDIDVVHGRTLTTPVSLLQCLKSIKEYAFVKSRYPIIITLEDHLTPDLQAKVAEMTTQTFGDMLYFPQTEPMTEFPSPESLKDRILISTKPPKEYLDTRQFKDTSDSEKEFSEEGSVSPALSAEADDKFNGSDVDDECFNPRDRKPDQQSAPEYKRLITIHAGKPKGQIRDHLIVAGNVKRLSLSEQELEKASVSYGADIVRFTQKNIIRVYPKGTRVTSSNYRPHIGWMYGAQMVALNMQGHGKSLWYMQGMFSANGGCGYVKKPEFLLAKVPRNECFDPKRTLPAKKTLKVKVYLGHGWSTDFSKTHFDTFSPPDFYTKICIVGVPADKIHKKTKIIHDDWFPVWDEEFDFPLSVPELALLSIEVREYDKHEKDDFGGQICLPVPELKSGFRAVPLYDQKGEKLKSVKLLMRFQFT* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0774 593 CDD C2_PLC_like 463 593 - -
Psa2g0774 593 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 465 592 IPR035892 -
Psa2g0774 593 Gene3D C2 domain 461 593 IPR035892 -
Psa2g0774 593 SMART plcy_3 329 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa2g0774 593 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 265 - -
Psa2g0774 593 Pfam C2 domain 466 567 IPR000008 -
Psa2g0774 593 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Psa2g0774 593 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Psa2g0774 593 PRINTS Phospholipase C signature 249 266 IPR001192 GO:0035556
Psa2g0774 593 PRINTS Phospholipase C signature 383 404 IPR001192 GO:0035556
Psa2g0774 593 PRINTS Phospholipase C signature 404 422 IPR001192 GO:0035556
Psa2g0774 593 PRINTS Phospholipase C signature 559 569 IPR001192 GO:0035556
Psa2g0774 593 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 592 IPR001192 GO:0035556
Psa2g0774 593 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 265 IPR000909 -
Psa2g0774 593 SMART plcx_3 121 265 IPR000909 -
Psa2g0774 593 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 358 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa2g0774 593 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 357 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa2g0774 593 ProSiteProfiles C2 domain profile. 444 575 IPR000008 -
Psa2g0774 593 MobiDBLite consensus disorder prediction 271 288 - -
Psa2g0774 593 MobiDBLite consensus disorder prediction 271 327 - -
Psa2g0774 593 SUPERFAMILY PLC-like phosphodiesterases 121 445 IPR017946 GO:0006629|GO:0008081
Psa2g0774 593 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 592 - -
Psa2g0774 593 Pfam Phosphoinositide-specific phospholipase C, efhand-like 27 72 IPR015359 -
Psa2g0774 593 SMART C2_3c 465 573 IPR000008 -
Psa2g0774 593 Gene3D - 23 113 - -
Psa2g0774 593 SUPERFAMILY EF-hand 9 123 IPR011992 -
Psa2g0774 593 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 457 IPR017946 GO:0006629|GO:0008081
Psa2g0774 593 MobiDBLite consensus disorder prediction 303 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0774 Psa-Chr2 47291095 47294920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0774 5 592 Acyl Lipid Metabolism Gene Families AT2G40116 57.423 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0774 K05857 - gmx:100777010 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2995 5 230503201 230506882 Psa2g0774 2 47291095 47294920 ECH
Psa2g0774 2 47291095 47294920 Psa2g0774 2 47291095 47294920 ECH
Psa5g2996 5 230567064 230571343 Psa2g0774 2 47291095 47294920 PCT