Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0776 ATGGGAAATAGCATAGTAACATACAACAAATACAAAAGTTTCTTGTTCTTTATCAAAAAATACAAGTTGACTGAGCTCGTTCCGCCTCAGGATCTTCAAGAGGTTTTTTCCAAGTTTGCCGGAGGTGGATCGTGCATGTCAACTGAGCAATTACACCGGTTTCTCGTGGAGCATCAAGGCGAAGAGAGTTTCACTTTATCGGATTCGGAGAAAATTATTGACAGGATTTTGCAACTGAGAAGGACGCATACGGAAACGGTTCATGTTGATCAAAATAGAGAAAGGGAAATCACTCTTGATGATATCTTCCGATTTTTGCTTCTAGATGATTTCAACGGTCCTTACAAAAACAAGGTACATCATGATATGAATGCTCCATTGTCACATTATTTCATATATACAGGACACAATTCCTATCTTACTGGAAATCAATTAAGCAGTGATTGCAGCGAAGAGCCGATCATAAAGGCGCTTCAACGAGGCGTGCGTGTTATCGAACTCGATTTATGGCCAACTTCTAATAAAGATGATATTAAAGTTGATCATGGATGGACACTTACAAATCCTGTCTCACCTATCAAATGTTTGGAGTCTATAAAGAAATATGGTTTTGTTGCATCTCAATATCCAGTGATCATAACTATAGAAGATCATCTTACAGAAGAACTTCGAGCGAAATTCGCAGAAATGGCAACTCAAATATTTGGAGAAATGCTTTATTATCCTCAAGCAGAATGTTTAAACTTAACAGAATTCCCTTCACCGGAATCATTGAAAAATCGAGTTATTATATCAACCAAACCTCCAAAAGAACGCTTTGAGTCCAACCGAATCAAGGACAATGGCAACTATCCTGTACTAGATGGAAGTAGTGAATCATCAGAAGACGAATCATCGGGACAGGAATCACCAGACTCCGCGAATGAAGTGGAGATTAAGAGCACGAATGGACGTGATCGCGACGAGGGAGAAACCAGTTCGTGTGAATGTGATCAAAGATTATTTCAAGAGTGTTCACCTGATTACAAAAGTATAATCACAATTCATAATAAGAAACTCAAGGGTAGCTTGAAAGATAAATTGAAAACCGATGGTGAACTCAGACGGTTAAGTTGGAGCGAAACAACCTTAGAAAAGGCTTCGGAATCTCATGGAACAGACATCATTAGGTTCACACAGAAAAATATCCTCAGGGTATATCCAAGGGCGACACGTGTCAAATCATCGAATTTCAAACCATATCTCGGGTGGATGTATGGAGCTCAGATGGTCGCATTCAATATGCAGGGGGTTGGAAAATCTCTCTGGTTGATGCAGGGGATGTTTAGAGCAAATGGAGGGTGTGGTTATGTAAAAAAACCTGAAATTCTAATGCAGAAACTTCACTGTGACCATGAGTTTGATCCAACAAGGATAATGCCAGTAAAGAAGACATTAAAGGTGAAACTATACATGGGACATGGATGGAGTTTAGATTTCAGTCCTACACACTTTGATATGTTCTCTCCACCAGACTTTTACTCAGAGGTTGGTATTGTTGGTATGCCTTGTGATATTACAAAGAAGAAGACTAAAGTGATCATGGACAATTGGTTTCCTGTGTGGAATGAAGAGTTTGAATTCCCTATAACTGTTCCAGAGATTGCCTTACTTCAGATACAAGTAAAAGACAGAGATCCAACTGGAAAAGATGATTTTGCTGGTCAAACATGTTTGCCTGTGTCTGAGCTAAGATCTGGATTTAGATCGGTCCCTTTGTATAATGAAAAGGGAGAACAATTTAAATCTGTAAAGTTGCTAATGAGCTTTCAGTTTGAATGA 1821 0.3893 MGNSIVTYNKYKSFLFFIKKYKLTELVPPQDLQEVFSKFAGGGSCMSTEQLHRFLVEHQGEESFTLSDSEKIIDRILQLRRTHTETVHVDQNREREITLDDIFRFLLLDDFNGPYKNKVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALQRGVRVIELDLWPTSNKDDIKVDHGWTLTNPVSPIKCLESIKKYGFVASQYPVIITIEDHLTEELRAKFAEMATQIFGEMLYYPQAECLNLTEFPSPESLKNRVIISTKPPKERFESNRIKDNGNYPVLDGSSESSEDESSGQESPDSANEVEIKSTNGRDRDEGETSSCECDQRLFQECSPDYKSIITIHNKKLKGSLKDKLKTDGELRRLSWSETTLEKASESHGTDIIRFTQKNILRVYPRATRVKSSNFKPYLGWMYGAQMVAFNMQGVGKSLWLMQGMFRANGGCGYVKKPEILMQKLHCDHEFDPTRIMPVKKTLKVKLYMGHGWSLDFSPTHFDMFSPPDFYSEVGIVGMPCDITKKKTKVIMDNWFPVWNEEFEFPITVPEIALLQIQVKDRDPTGKDDFAGQTCLPVSELRSGFRSVPLYNEKGEQFKSVKLLMSFQFE* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0776 606 SMART plcx_3 121 267 IPR000909 -
Psa2g0776 606 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 267 IPR000909 -
Psa2g0776 606 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 606 IPR001192 GO:0035556
Psa2g0776 606 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 368 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa2g0776 606 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 471 IPR017946 GO:0006629|GO:0008081
Psa2g0776 606 SUPERFAMILY PLC-like phosphodiesterases 121 459 IPR017946 GO:0006629|GO:0008081
Psa2g0776 606 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 477 605 IPR035892 -
Psa2g0776 606 ProSiteProfiles C2 domain profile. 457 588 IPR000008 -
Psa2g0776 606 MobiDBLite consensus disorder prediction 312 326 - -
Psa2g0776 606 Pfam Phosphoinositide-specific phospholipase C, efhand-like 29 75 IPR015359 -
Psa2g0776 606 CDD C2_PLC_like 476 606 - -
Psa2g0776 606 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Psa2g0776 606 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Psa2g0776 606 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Psa2g0776 606 PRINTS Phospholipase C signature 396 417 IPR001192 GO:0035556
Psa2g0776 606 PRINTS Phospholipase C signature 417 435 IPR001192 GO:0035556
Psa2g0776 606 PRINTS Phospholipase C signature 572 582 IPR001192 GO:0035556
Psa2g0776 606 Gene3D C2 domain 473 606 IPR035892 -
Psa2g0776 606 Pfam C2 domain 499 580 IPR000008 -
Psa2g0776 606 MobiDBLite consensus disorder prediction 272 326 - -
Psa2g0776 606 SMART plcy_3 342 458 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa2g0776 606 SUPERFAMILY EF-hand 5 123 IPR011992 -
Psa2g0776 606 MobiDBLite consensus disorder prediction 286 311 - -
Psa2g0776 606 Gene3D - 23 114 - -
Psa2g0776 606 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 267 - -
Psa2g0776 606 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 371 457 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Psa2g0776 606 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 606 - -
Psa2g0776 606 SMART C2_3c 478 586 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0776 Psa-Chr2 47350505 47353745 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0776 2 606 Acyl Lipid Metabolism Gene Families AT2G40116 54.545 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0776 K05857 - gmx:100820253 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2995 5 230503201 230506882 Psa2g0776 2 47350505 47353745 PCT