Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1040 ATGCCTGGAAACACAACAAAAGCTAGCCTTAGTCATCATCAATCTTTCGACATCGAACGTTCCATAGACGATGTGGTTTCTCAAGCAGATAGTGCCTCTAAATGCTATGATGACGACGGCCGTCTCAAACGAACCGGAAGTGTTTGGACTGCAAGTTCACACATAATAACAGCTGTGATAGGTTCTGGAGTGTTGTCTTTGGCTTGGGCTATAGCTCAGCTAGGTTGGATTGCTGGTCCTGCTGTTATGATACTATTCTCTTTGGTTACTGTCTATACTTCTTCTTTTCTCGCGGATTGTTATCGCGCTGGCGACCTCAATTCCGGCAAAAGAAACTATACTTACATGGACGCGGTTCGCTCCATTCTTGGTGGAGTAAATGTTACGTTTTGCGGGATATTTCAGTACCTGAATCTATTTGGAATTGTAATAGGATACACCATTGCTGCTTCTATTAGCATGACGGCAATCAAAAGGTCGAACTGTTTCCATGAATCCAAGGACAAAAACCCATGTCACATGTCAAGCAACCATTTCATGATCGCTTTTGGCGTAATGGAAGTTTTCCTATCTCAAATTCCAGATTTTGATCAAATATGGTGGCTCTCATCAGTTGCTGCAGTCATGTCTTTTACATATTCCATAATTGGTCTTGCTCTTGGAATTGTCAAAGTTGCAGAAAATGGTACTATCATGGGTAGCCTCACAGGAATCAGCATTGGAGCTGTATCAGAGACTGAAAAGATATGGAAGACTTCTCAAGCTCTCGGTGACATAGCCTTTGCATATTCATACGCGGTGGTTCTCATTGAAATTCAGGACACGTTGAAATCTCCACCATCCGAGGCAAAATCGATGAAGAAAGCAACAAAGATAAGTATTGCAGTGACCACAACATTTTACATGCTTTGTGGCTGCATGGGATATGCTGCATTTGGAGATGCAGCGCCCGGGAATCTTCTAACTGGTTTTGGTTTCTACAATCCTTTTTGGCTAGTAGACATAGCAAATGCAGCGATAGTAGTTCATCTAGTTGGAGCATACCAAGTTTTTTCCCAACCAATCTTTGCCTTTGTGGAGAAATCTGCAACACAGAGATGGTCCAACATTAACAGAGAATTCAGAATTGCGATTCCTTTTCTTCCGCCTTACAACTTGAACTTATTTAGATTGGTTTGGAGGACAATGTTTGTTATCTTAACCACTGTTATATCAATGTTGCTTCCATTTTTCAATGACATGGTTGGAGTTATAGGTGCACTGGGATTTTGGCCTTTAACTGTTTATTTTCCTGTGGAGATGTATATCTCACAGAAGAAAATACCAAAATGGAGTAATAGATGGATTTGCTTACAAATCTTTAGTGTGGCTTGCCTTGTAATATCAGTAGTTGCTGCAGTTGGATCAATCGCTGGTGTCTTGAATGATCTGAAAAAATACAAACCATTTCAATCAAACTATTAA 1464 0.4064 MPGNTTKASLSHHQSFDIERSIDDVVSQADSASKCYDDDGRLKRTGSVWTASSHIITAVIGSGVLSLAWAIAQLGWIAGPAVMILFSLVTVYTSSFLADCYRAGDLNSGKRNYTYMDAVRSILGGVNVTFCGIFQYLNLFGIVIGYTIAASISMTAIKRSNCFHESKDKNPCHMSSNHFMIAFGVMEVFLSQIPDFDQIWWLSSVAAVMSFTYSIIGLALGIVKVAENGTIMGSLTGISIGAVSETEKIWKTSQALGDIAFAYSYAVVLIEIQDTLKSPPSEAKSMKKATKISIAVTTTFYMLCGCMGYAAFGDAAPGNLLTGFGFYNPFWLVDIANAAIVVHLVGAYQVFSQPIFAFVEKSATQRWSNINREFRIAIPFLPPYNLNLFRLVWRTMFVILTTVISMLLPFFNDMVGVIGALGFWPLTVYFPVEMYISQKKIPKWSNRWICLQIFSVACLVISVVAAVGSIAGVLNDLKKYKPFQSNY* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1040 487 Pfam Transmembrane amino acid transporter protein 44 473 IPR013057 -
Psa7g1040 487 PANTHER OS02G0102200 PROTEIN 24 481 - -
Psa7g1040 487 PANTHER OS05G0424000 PROTEIN-RELATED 24 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1040 Psa-Chr7 77845329 77847698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1040 14 487 Organic Solute Cotransporters AT5G09220 76.360 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1040 K24917 - gmx:100782803 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1040 7 77845329 77847698 Psa7g1040 7 77845329 77847698 ECH
Psa7g1040 7 77845329 77847698 Psa5g1385 5 107759831 107766830 ECH