Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g5035 ATGGACTTGGTTCCATTATTATGCACAAAAACCTTAGCCTCTTCTTCTATAACTTTTCTTAGCATAAAAATGGCTTCCAGACCAGGCATACTCACTGAATGGCCATGGGCACCTCTCGGGAGTTTCAAGTGGGTGATTTTGACACCATTTGTAGCAAACAGCACATACTCTTTCTTGTTCAACAGTTCAGAAGAAAAAGACCTAAGCAACTTCCTCATCTTCCCATATATGATGATCAGAATGCTTCATGACCAAATTTGGATCTCTCTTTCTCGTCATCGAACCGCCAAAGGCAAAAACAGAATCGTCGACAAAGGGATCGAGTTCGAACAAGTCGATCGAGAAAGCAACTGGGATGATCAAATATTATTCAATGCATTGATATTTTATATTGGTCAAATGTTGGTACCAGAGTCACGTAAATTGCCTATATGGAGAACTGATGGTGTGGTTATGACAATTCTTCTGCATACTGGACCAGTGGAGTTTCTATATTATTGGTTGCATAGAGCACTTCATCATCATTATCTTTACTCTAGATATCATTCTCATCATCATTCTTCCATTGTTACAGAACCAATAACTTCTGTGATACATCCATTTGCAGAACATATAGCATACTTTCTGCTATTTGCAATTCCATTATACACAACAGCAATTACAAAAACAGCATCTATAGCATCCTTTGCTGGTTATCTTGCTTACATTGATTTCATGAATAATTTGGGTCACTGTAATTTTGAGTTCATTCCAAAGATCATTTTCACCATCTTTCCTATCCTTAAGTATACCATGTATACACCATCGTTTCACTCACTGCATCATACACAATTTCGAACCAACTATTCCCTCTTTATGCCAATATATGATTACATTTATGGAACTGTTGACAAAGCTTCAGAAACATTATATGAGAAATCATTGAAGAAAGAAGATAGTACACTAGATGTTGTGCATTTAACACATCTCACAACACCTGAATCAATCTATCATCTAAGATTGGGATTTTCTTCCTTAGCATCTTCACCTCAATCTTCTTCATGGTACCTCTATTTCATGTGGCCATTCACTTTTTGGTCTGTTCTTGTCACTTGGTTTTATGGTCAAACTTTTGTTCTTGAGAGAAACTCTTTTGAAATGCTCAATTTGCAATCATGGGTTATTCCAAGATTTCATGTACAATATCTTTTTAAATGGCAAAGAGAAACATTGAATAAACTTATAGAAGAAGCAATACTTCAAGCAGAACTCAGCAAAGTTAAGGTTCTAAGTTTAGGTCTTTCAAATCAGGGAGACTTGTTGAATAGATATGGTGAACTATACATTAAAAGGTATCCCCAACTTAAGATAAAGATTGTTGATGGAAGTAGCTTGGGTGTGGCTATTGTTCTTAATAGCATTCCAAAAGAAACAAATGAAGTTTTTCTTTGTGGTAGACTTGATAAGGTTTCATATGCCATTGTCAATGCTTTATGTGAAAGGGGTACCAAGGTAACTTTCATTGGTTCTCGCATGTATATAACCACACTGATAATCGTTGGATCAAAATCAGACAATGTTGTCAAATCTTAA 1572 0.3575 MDLVPLLCTKTLASSSITFLSIKMASRPGILTEWPWAPLGSFKWVILTPFVANSTYSFLFNSSEEKDLSNFLIFPYMMIRMLHDQIWISLSRHRTAKGKNRIVDKGIEFEQVDRESNWDDQILFNALIFYIGQMLVPESRKLPIWRTDGVVMTILLHTGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLYTTAITKTASIASFAGYLAYIDFMNNLGHCNFEFIPKIIFTIFPILKYTMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTVDKASETLYEKSLKKEDSTLDVVHLTHLTTPESIYHLRLGFSSLASSPQSSSWYLYFMWPFTFWSVLVTWFYGQTFVLERNSFEMLNLQSWVIPRFHVQYLFKWQRETLNKLIEEAILQAELSKVKVLSLGLSNQGDLLNRYGELYIKRYPQLKIKIVDGSSLGVAIVLNSIPKETNEVFLCGRLDKVSYAIVNALCERGTKVTFIGSRMYITTLIIVGSKSDNVVKS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g5035 523 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 24 507 - -
Psa4g5035 523 PANTHER STEROL DESATURASE 24 507 - -
Psa4g5035 523 Pfam Fatty acid hydroxylase 161 295 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g5035 Psa-Chr4 438054102 438058292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g5035 24 501 Lipid Metabolism Gene Families AT1G02190 58.385 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g5035 K15404 - gmx:100818557 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g5035 4 438054102 438058292 Psa4g5035 4 438054102 438058292 ECH
Psa2g4144 2 421039715 421042291 Psa4g5035 4 438054102 438058292 ECH
Psa4g1567 4 109289108 109291699 Psa4g5035 4 438054102 438058292 ECH