Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1567 ATGGGTATCTGGTTTTCAACAACCTCATCATCCCACTCATCCAAACCGAGTTTAGATGAATTACCCGAAAGCTGCGTTGCTGCTGTCATGGAATACATGGATCCTCCTCAGATTTGTAAATTAGCTTCCTTGAATCGCACTTTTCGCGGCGCTTCTTTGGCTGATTTTGTATGGGAATCCAAACTTCCTTCTAATTATGACATCATTCTCAGGAAAATCTTTCACGCGGGTAGTTTTCCGTCTCATTTGGGGAAAAGAGAGATTTATTCGCGACTTTGTTCCCTTAATACTTTCGATGATGATGGCAACAAGAAAGTTTGGTTGGATAGAAGTATGGGTAAGCTGTGTTTGTGTATTTCGGCTAAAGGATTGTATATAACAGGGATTGATGATCGAAGATATTGGAACCATATTCCCACGGAAGAATCCAGATTCAGTAGTGTTGCATATCTCCAACAAATCTGGTGGTTTGAAGTGGACGGTGAAGTCGAGTTTCCATTTCCACCTGGAACATACAGCTTATTCTTCAGAATACATCTAGGGAAAGCCTCCAAGAGATTTGGAAGAAGGGTTTGCAACACAGAACATGTTCATGGGTGGGATATAAAGCCTGTTAGATTCCAGCTATGGACTTCAGATGATCAACATGTTGCATCACATTGTTTTCTGAAAGGTACGGGCAAATGGCGCTACTACCATGCAGGCGATTTCGTGGTTGAAGATGGTAATGTTTCAACAAAAGTAAAATTCTCTATGACTCAAATTGATTGCACACATACTAAAGGGGGTCTCTGTTTAGATTCTGTGTTTGTGTTTCCTAGTGAGTTTAGAAAGGTTAAGGAATTTTTGAACCACTCTTAA 861 0.4053 MGIWFSTTSSSHSSKPSLDELPESCVAAVMEYMDPPQICKLASLNRTFRGASLADFVWESKLPSNYDIILRKIFHAGSFPSHLGKREIYSRLCSLNTFDDDGNKKVWLDRSMGKLCLCISAKGLYITGIDDRRYWNHIPTEESRFSSVAYLQQIWWFEVDGEVEFPFPPGTYSLFFRIHLGKASKRFGRRVCNTEHVHGWDIKPVRFQLWTSDDQHVASHCFLKGTGKWRYYHAGDFVVEDGNVSTKVKFSMTQIDCTHTKGGLCLDSVFVFPSEFRKVKEFLNHS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1567 286 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
Psa4g1567 286 SUPERFAMILY F-box domain 10 93 IPR036047 GO:0005515
Psa4g1567 286 Pfam Phloem protein 2 115 273 IPR025886 -
Psa4g1567 286 ProSiteProfiles F-box domain profile. 15 61 IPR001810 GO:0005515
Psa4g1567 286 PANTHER F-BOX PROTEIN PP2-A12 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1567 Psa-Chr4 109289108 109291699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1567 - - gmx:100788842 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1567 4 109289108 109291699 Psa4g1567 4 109289108 109291699 ECH
Psa4g1567 4 109289108 109291699 Psa4g5035 4 438054102 438058292 ECH