Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4144 ATGGGTCTTCGATTTTCTTCTCTTCTATGTACCTCAACTGCTTCTTCCGGTCCCACTCTCGGTGATTTGCCCGAGAGTTGCGTCGCTTCCATTATCGGTTACATGGATCCTCCTCAGATCTGTCAACTTGCTACATTGAATCGAGCTTTTAACGCTGCTTCTTCGGCTGATTTTGTCTGGGAATCCAAATTGCCGTCTAATTATCATCTTATCCTCAACAAAATCTTCGACCATTTTCCAATTGATTTGGGTAAACGTGATATTTACGTTTCCCTTTGTAGCCTCAATGACCTTGACGGGGGCACCAAGAAAGTTTGGCTTGATAGAGGCAGCGGTAAGCTTTGTTTGGCTATATCAGCTAACAAAGGACTATCAATCACTGGGGTTGATGATAGGAGATATTGGAATCATATCCTTACTGAAGAATCTAGATTCAGTACTGTTGCATACCTTCAGCATACCTGGTGGTTTGAAGTGGAGGGGGAAGTTGACTTCCCATTTCCTGCTGGAACATATAGCTTATTCTTCAGAGTACACCTTGGGCGAGCCCACAAGAGATTTGGACGTCGGGTCTGCAACACTGAACATGTTCATGGGTGGGACAAAAAGCCTGTGCAATTCCAACTTTGGACATCTGACGGGCAATACGTTGCCTCCCAGTGTTTTCTGAAAGGAACTGGCAATTGGACTTTTTACCATGCAGGCGATTTCACTGTTGTGGATGGCAATTCATCAACCAAAGTCAAGTTCTCTATGACTCAAATTGACTGCACACACACTAAAGGTGGTATCTGTTTGGATTCTGCCTTTATTTATCCAAGCGAATTCAAAAAGACTAAGTCATTTTTAAATTGCTCATAA 861 0.4309 MGLRFSSLLCTSTASSGPTLGDLPESCVASIIGYMDPPQICQLATLNRAFNAASSADFVWESKLPSNYHLILNKIFDHFPIDLGKRDIYVSLCSLNDLDGGTKKVWLDRGSGKLCLAISANKGLSITGVDDRRYWNHILTEESRFSTVAYLQHTWWFEVEGEVDFPFPAGTYSLFFRVHLGRAHKRFGRRVCNTEHVHGWDKKPVQFQLWTSDGQYVASQCFLKGTGNWTFYHAGDFTVVDGNSSTKVKFSMTQIDCTHTKGGICLDSAFIYPSEFKKTKSFLNCS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4144 286 PANTHER F-BOX PROTEIN PP2-A12 1 281 - -
Psa2g4144 286 SUPERFAMILY F-box domain 14 88 IPR036047 GO:0005515
Psa2g4144 286 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
Psa2g4144 286 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
Psa2g4144 286 Pfam Phloem protein 2 114 273 IPR025886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4144 Psa-Chr2 421039715 421042291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4144 - - gmx:100788842 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4144 2 421039715 421042291 Psa2g4144 2 421039715 421042291 ECH
Psa2g4144 2 421039715 421042291 Psa4g5035 4 438054102 438058292 ECH