Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3190 ATGGTTATGCAGAAGAGGTTGGATTATGGTTTTAATGGCTATGAAGTTCCTTCCGTTCCTCGAGCTTCGAGATCTCCAAGGGGAAGAGGTAAAATCAGGAAGAAACCCGACAGCAATCAGATACAGGCATTTGATATTTTGGCTAGTGTAGCTGGCAATCTCTTGCAGAAGAATCAGATTTTGGTTCCTGATAATGCTGCTTCTGCGAAAGATCCTCGTTCTTTTTCTGGTGTTAGCGTAAAGGAAAACAAACAAGAGAATCAAGCAGGACCGTTTAAGGAGGAACGATTCAAGCATGGAACTTGTTGTGAAGTTGTCTCCGGTTGTGTCCCTAGTTTGCAATTGAAACAGGAAAACCAAAGAGTCATGGGCGATTCTTCTTCACCTGAAAACCATCTTGAAGGACAAGGACAGAATGTCCTCGAGAGGGAAGATGAACGTGTGAAAATGAGAACCACGAATGAGAAAGTCATCCACATTAAAAGCAGATCGGATGGATTAATAGAACCAGGCCAAAAAGCATCGAAAGATTGCAGTGCAGAAAATCACGTGGAAAAGCCTTCGTTGGAGGGTCGTAGCCACATGAATCTTGATTCTTTAGCAAATGGTTGCGCTACAAGGAAATTAGTTAATAGAGATGATGACGAAAACTTTGTTAGGTGTGCTCAACCGAATTCAAAGATTAAGATATCTGGCTCACCCGGCTCACCACCAGATACGATAAAGGTTAAGGATGCAAGTCATTTTGTGAATGATGAGAACAATAGCGGGGACAATTCGGTGCTTGAAAATTCCGAAAGGATGTACCCATTTAAGAAAAGAAAGTTTTTCTATCAAACTTCATCGTCTACGTCTGATAGCTGGTCTCACTGTCAAGGCATAGTTGATTCTTCTAGTACAAGGGTTAATGGTACAAACCATGGTGCAGTAATTGAAGAATCGTCTTCTATGGCTGATCAACAAGTACATCCCGCGTCCAAGGGTTGTAATGTGAAGCTTAGCATAAAATCCTTTAAAGTCCCCGAGCTTTTTATCGATATACCTGAGACCGCAACGATTGGTTCACTCAAGAGGACGGTAATGGAAGCTGTGACAGCTATACTTGGAGACGAACTACATGTAGGCATACTTCTTCAGGGAAAGAAGGTTCGAGATGACAGCAAAACTTTGATCCAGACCGGGATCTCTCAAGATGACAAACGCCATAGGTTAGGATTCATGTTGGAGCCAAGACATAACCGAATGTCATCTTCGTACAATGACGACCCTTGTTTCCTAACCACTGGTTCACGACAAAAGCTATCTAGGCAATCGAATTCTTTAATGTTACAACAAGGAAGTTATAATGTGTCTCGAGAACGTTCTACGGTCAAAATCGAAAATTGTGCGGAAGGTGATCTTAACGGGGTGTCCTCTCTAGGAGATACTTCAGCTAACAACAATAACATGTCAAAATGCCGCGCCCTGGTGACAGTTCCTGCCATCAACATGGATGCATTAGCTGTGGTTCCGTACCGGCGCAAATCAGGGAATCCTGACTTTGGACAGCGCCGCATAAGGAGGCCGTTTTCTGTTCTAGAAGTTGAAGCATTGGTTCAGGCAGTTGAAAAACTAGGAACCGGAAGATGGCGAGATGTCAAACAACGCGCTTTTGACAATGCTAAGCATCGAACTTATGTGGATTTGAAGGATAAGTGGAAGACATTGGTTCACACAGCGAGAATCTCCCCTCAGCAAAGAAGAGGAGAGCCTGTTCCTCAAGAGCTTCTCGACAGGGTCTTAGCCGCTCATGCCTATTGGTCTCAACAACAATGTAAGCATCAACTTAAATCAATGTGA 1839 0.4334 MVMQKRLDYGFNGYEVPSVPRASRSPRGRGKIRKKPDSNQIQAFDILASVAGNLLQKNQILVPDNAASAKDPRSFSGVSVKENKQENQAGPFKEERFKHGTCCEVVSGCVPSLQLKQENQRVMGDSSSPENHLEGQGQNVLEREDERVKMRTTNEKVIHIKSRSDGLIEPGQKASKDCSAENHVEKPSLEGRSHMNLDSLANGCATRKLVNRDDDENFVRCAQPNSKIKISGSPGSPPDTIKVKDASHFVNDENNSGDNSVLENSERMYPFKKRKFFYQTSSSTSDSWSHCQGIVDSSSTRVNGTNHGAVIEESSSMADQQVHPASKGCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTAILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKRHRLGFMLEPRHNRMSSSYNDDPCFLTTGSRQKLSRQSNSLMLQQGSYNVSRERSTVKIENCAEGDLNGVSSLGDTSANNNNMSKCRALVTVPAINMDALAVVPYRRKSGNPDFGQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQLKSM* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3190 612 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 612 - -
Psa3g3190 612 SUPERFAMILY Homeodomain-like 521 602 IPR009057 -
Psa3g3190 612 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 612 IPR031105 -
Psa3g3190 612 MobiDBLite consensus disorder prediction 66 90 - -
Psa3g3190 612 CDD SANT_TRF 521 571 - -
Psa3g3190 612 Gene3D - 510 612 - -
Psa3g3190 612 SUPERFAMILY Ubiquitin-like 327 410 IPR029071 -
Psa3g3190 612 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 515 574 IPR017930 -
Psa3g3190 612 SMART sant 519 572 IPR001005 -
Psa3g3190 612 ProSiteProfiles Myb-like domain profile. 515 570 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3190 Psa-Chr3 269544796 269549551 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3190 - - gmx:100801280 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3190 3 269544796 269549551 Psa5g2876 5 218962807 218967483 ECH
Psa3g3190 3 269544796 269549551 Psa2g0935 2 66537201 66541555 ECH
Psa3g3190 3 269544796 269549551 Psa3g3190 3 269544796 269549551 ECH