Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0935 ATGGTGTTGAAGAAGAGGCTGGGTAATGGACTTAGGGGATTTCAGGTCCCTGAGATACCTAAATGTCCAAGATCTACCAGAACGAGGGTTCCGATCGAGAAACCGGCTGAGGATGGTGGCGCGTGTGCTTTTGAACTACTTGCATCTTTAGCCGGGAAGTTGCTGCAGGAGAGTGAAAGTTCCAATTCTAGTAATGTGTCTGAAGGTAGGCTGTTAACCGAAGAGCAATATCGAGATGGAAGTTGTGATGAAAAGAGCTGTGAGAAACGCGTTGAGATTAGTGAGAGTGATTGTTTACTAGAATGCATTTCAGCTAGTGATAATGTGAAGTCTGAGATTTTAAAATTGGAGAATAAGTTTGGGAATCATTCTAATACTAATAGACTCGTGGAATTACCGAACAATCACGAGGTTGGAAGTTCTGGCTTCGAGCGATTATCTGCGGATGATAAGTTTAGTTTGAAGGATCCGTTGGAGTTACGTGTTAACTCTCCTTCATTAGTCGATTTGAACAGTAATGTTGTTAAATCTCCATTTCGTGGGGAGTTGTTTCCCAATGCTTCCTTTTCGAGGCACGGGAATGATAATAAGTTACATTTTATTGATGATGACGAAAAATTTATTAGGTGCAACAAAGTTTGCACCAAACCGAAGGCTTTTAGACCTTCACGGTGCATTGCTCGCAAAATAATCAGGAAGCGGTTGACTTCCAAACACTGGAAGGTTGCTCCAAAGTTGAAGGATTATGAACGTTCTAGATATGATAAGGGAATAAAACCCTCAAGTCGCAAAAGGAAGACTTATTACAATTTCGAAAGATCTCAGTGTTACACTCTTTCAAAGAGGAAGAAATTATCAGAGAAGGGTTCAATGGTAACTCATTGTGGAGGATTCAGCAGTGAGAGTGTATCTGATTTACCTAAGAAAGGAATTTGTGGAAATAACCGAAGCTCTTCTACAAAAGCTCATGTCTCTAAAGATTCTCATGTCAAGTTTAGAATCAAGTCATTCAGGATTCCAGAGCTTTATGTTGAAGTTCCCGAAACCGCAACTGTGGGTTCATTAAAGAGGACAGTCATGGAGGCAGTGATGACTCTAATAGGAGGTGGAGTGCATGTTGGTGTTCTTGCTCAGGGGAAGAAAGTTAGAGATGACAACAGAACTCTTCGGCAAACTGGTATATCTTGTAAAGAAAATCTAGATAAACTCGGTTTTGTTTTGGAGCCTAGTTCTTCTCAAGCTTCTCCAGTTGTTTGCGCCGGTGATACTTCTCACTGTGAAGCGTCTGAGCCAACTATGTCTCTAAGAACTCCCTCCATAGAATCAGGGGTTTCTGTTACCAAGCAAGATTCTTCCTTGATTACAAATACCGGTGACCTTGTTGAAAATAACCATGAATCAGCTTCTTCCCTGGATGACACTATGTCTGATAAACTAACACAAGATTCTGGAGCGCTAGTTCCTGTTCCAGATAATAGCTCAGAGGTATTAGCTGCCGTTCCCGTGAGTCACAACACCGGACACTCTGAGATTGTACAGCGTCGAACCAGGAGACCGTTTTCTGTTTCTGAAGTGGAAGCACTTGTTCATGCAGTTGAAGAAGTTGGAACTGGAAGGTGGCGTGATGTAAAGTTGCGATGTTTTGAGAATGCAGATCATAGGACTTATGTAGACTTAAAGGATAAATGGAAAACTTTAGTACACACTGCCAAAATCTCCCCTCAACAAAGGAGAGGACAGCCAGTTCCTCAGGAGCTGTTGGATAGGGTTTTGGCTGCTCATGCCTTTTGGTCTATCCACCAAACCAAACATCATGTCAAGCATCAAACCAATGGTGACCAACCACTTGTGATTATGTAG 1860 0.4204 MVLKKRLGNGLRGFQVPEIPKCPRSTRTRVPIEKPAEDGGACAFELLASLAGKLLQESESSNSSNVSEGRLLTEEQYRDGSCDEKSCEKRVEISESDCLLECISASDNVKSEILKLENKFGNHSNTNRLVELPNNHEVGSSGFERLSADDKFSLKDPLELRVNSPSLVDLNSNVVKSPFRGELFPNASFSRHGNDNKLHFIDDDEKFIRCNKVCTKPKAFRPSRCIARKIIRKRLTSKHWKVAPKLKDYERSRYDKGIKPSSRKRKTYYNFERSQCYTLSKRKKLSEKGSMVTHCGGFSSESVSDLPKKGICGNNRSSSTKAHVSKDSHVKFRIKSFRIPELYVEVPETATVGSLKRTVMEAVMTLIGGGVHVGVLAQGKKVRDDNRTLRQTGISCKENLDKLGFVLEPSSSQASPVVCAGDTSHCEASEPTMSLRTPSIESGVSVTKQDSSLITNTGDLVENNHESASSLDDTMSDKLTQDSGALVPVPDNSSEVLAAVPVSHNTGHSEIVQRRTRRPFSVSEVEALVHAVEEVGTGRWRDVKLRCFENADHRTYVDLKDKWKTLVHTAKISPQQRRGQPVPQELLDRVLAAHAFWSIHQTKHHVKHQTNGDQPLVIM* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0935 619 CDD SANT_TRF 518 568 - -
Psa2g0935 619 ProSiteProfiles Myb-like domain profile. 512 567 IPR001005 -
Psa2g0935 619 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 611 - -
Psa2g0935 619 SUPERFAMILY Homeodomain-like 518 598 IPR009057 -
Psa2g0935 619 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 611 IPR031105 -
Psa2g0935 619 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 513 571 IPR017930 -
Psa2g0935 619 SMART sant 516 569 IPR001005 -
Psa2g0935 619 Gene3D - 506 609 - -
Psa2g0935 619 SUPERFAMILY Ubiquitin-like 326 410 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0935 Psa-Chr2 66537201 66541555 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0935 - - mtr:MTR_5g080010 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2876 5 218962807 218967483 Psa2g0935 2 66537201 66541555 ECH
Psa3g3190 3 269544796 269549551 Psa2g0935 2 66537201 66541555 ECH
Psa2g0935 2 66537201 66541555 Psa2g0935 2 66537201 66541555 ECH