Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3502 ATGGGTGACATAGTGAAACAAATATTAGCAAAACCGATCCAGTTAGCAGACCAAGTAACAAAAGCCGCAGATGAAGCGAGTTCCTTCAAGCAAGAATGCGGAGAACTCAAATCCAAAACGGAGAAGCTCGCCGCTCTTCTCCGGCAAGCAGCAAGAGCCAGCTCCGATCTATATGAACGTCCTACAAAACGGATCATCGAAGAAACCGAACAGGTACTCGACAAAGCACTTTCCTTAGTCCTAAAATGTCGTGCCAATGGTATCATGAAACGTGTCTTCACCATCATCCCCGCCGCCGCTTTCCGTAAAACATCTTCTCATCTCGAAAACTCCATCGGAGATGTTTCATGGCTGCTCCGTGTCTCCGCCCCTTCCGACGACCGTGGTGGCGAGTATCTCGGACTTCCTCCGATCGCCGCCAACGAGCCTATTCTCTGTTTCATTTGGGAACAGATCGCTATACTTTACACCGGTTCACAAGAAGATCGCTCCGACGCGGCGGCTTCCCTCGTGTCGCTGGCGCGTGGGAGTGATCGTTACGGGAAGCTTATCATTGAAGAAGGTGGGGTGGGGCCACTTTTGAAGCTGATCAAGGAAGGGAAAATGGATGGACAAGAGAATGCTGCTAGAGCTATTGGCCTTCTTGGTCGTGACTCAGAATGCGTTGAACATATGATTCATGCTGGTGTTTGTTCCGTGTTTGCGAAAATTCTTAAAGAAGGTCCAATGAAAGTTCAAGGTGTTGTTGCTTGGGCTGTTTCTGAACTTGTTGCTAATTATCCTAAATGTCAGGATCTTTTTGCGCAGCATAATATTATAAGGTTGCTTGTTGGTCATCTTGCTTTTGAAACAGTTGAAGAACATAGTAAATATGCTGTTGTTAGCATGAAAGCGACTTCGATTCATGCTGCTGTTGTTATGGCTAACAATAATAATAATAATTCAACATCTAATCTTAATCCAAAGAAGGGGAATGAAAATGGAGACGATGGTGTTGGTGGCGGAAACGGAAACAACAAACAAGGTCGCGTGTCGCATCATCCGCTGGGGGAAAGACCTAGAAATCTACATAGAGTGATCACAAGCACTATGGCGAAACATGCTGCTTCCAAGCCTACTCAGGGAGATGAAGCAAATCAAAATCAGAACTTTTTGTCCAATTCCAATCCTTCTAATGGTAATGGTAAGCAAGGAAGTCATAATAATCACCAGAGAAACTATTCGCATTCGGGAATTAACATGAAGGGAAGGGAATTTGAAGACGCGGAGACTAAGGCAAGTATGAAGGAAATGGCAGCAAGAGCTCTATGGCATTTGGCTAAGGGTAACGTGGTGATTTGTCGCAGCATAACAGAATCAAGGGCTTTGCTGTGTTTTGCTGTTTTACTTGAGAAAGGACCGGAGGCTGTGCAGTACAATTCAGCGATGGCGTTGATGGAGATTACTGCGGTTGCTGAGAAAGATGCTGAATTGAGGAAATCAGCATTTAAGCCTAATTCTCCTGCCTGCAAAGCAGTTGTTGATCAAGTGCTTAAGATAATCGAGAAACCAGATTCAGATCTCCTCATTCCTTGCGTCAAGGCGATTGGGAATTTAGCAAGGACATTCAAGGCTACCGAGACAAGGATGATCGGTCCGTTGGTGAAACTTCTTGACGAAGGAGAGGCGGAGGTTTCCAGGGAGGCGGCGATCGCGCTCAGGAAATTTGCCGGAAGTGAAAACTACCTTCATGTTGATCACTCCAAGGCAATTATTAGCGCAGGCGGCGCAAAACATTTGATTCAGCTTGTGTATTTCGGAGAACATCAGGTTCCAGCATTGGTTCTGCTTTCCTACATTGCATTGCACGTGCCGGATAGCGAAGAACTCGCTCTTGCCGAGGTTCTCGGAGTGCTTGAATGGGCATCCAAGCAATCTTTCATGCAACATGAAGAAACCCTTGAGGCATTGTTGCAAGAAGCCAAGAGTAGGTTGGAGCTTTATCAATCTAGAGGCTCAAGAGGATTCCATCATAAATTGCATCAGTAG 2028 0.4586 MGDIVKQILAKPIQLADQVTKAADEASSFKQECGELKSKTEKLAALLRQAARASSDLYERPTKRIIEETEQVLDKALSLVLKCRANGIMKRVFTIIPAAAFRKTSSHLENSIGDVSWLLRVSAPSDDRGGEYLGLPPIAANEPILCFIWEQIAILYTGSQEDRSDAAASLVSLARGSDRYGKLIIEEGGVGPLLKLIKEGKMDGQENAARAIGLLGRDSECVEHMIHAGVCSVFAKILKEGPMKVQGVVAWAVSELVANYPKCQDLFAQHNIIRLLVGHLAFETVEEHSKYAVVSMKATSIHAAVVMANNNNNNSTSNLNPKKGNENGDDGVGGGNGNNKQGRVSHHPLGERPRNLHRVITSTMAKHAASKPTQGDEANQNQNFLSNSNPSNGNGKQGSHNNHQRNYSHSGINMKGREFEDAETKASMKEMAARALWHLAKGNVVICRSITESRALLCFAVLLEKGPEAVQYNSAMALMEITAVAEKDAELRKSAFKPNSPACKAVVDQVLKIIEKPDSDLLIPCVKAIGNLARTFKATETRMIGPLVKLLDEGEAEVSREAAIALRKFAGSENYLHVDHSKAIISAGGAKHLIQLVYFGEHQVPALVLLSYIALHVPDSEELALAEVLGVLEWASKQSFMQHEETLEALLQEAKSRLELYQSRGSRGFHHKLHQ* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3502 675 Coils Coil 644 664 - -
Psa2g3502 675 Gene3D - 3 121 IPR036537 GO:0007166
Psa2g3502 675 PANTHER ARMADILLO REPEAT ONLY 4 1 670 - -
Psa2g3502 675 Pfam Armadillo/beta-catenin-like repeat 183 214 IPR000225 GO:0005515
Psa2g3502 675 Gene3D - 148 321 IPR011989 -
Psa2g3502 675 Gene3D - 384 657 IPR011989 -
Psa2g3502 675 PANTHER - 1 670 - -
Psa2g3502 675 Coils Coil 36 56 - -
Psa2g3502 675 SMART arm_5 218 258 IPR000225 GO:0005515
Psa2g3502 675 SMART arm_5 177 217 IPR000225 GO:0005515
Psa2g3502 675 SMART arm_5 499 534 IPR000225 GO:0005515
Psa2g3502 675 SMART arm_5 577 615 IPR000225 GO:0005515
Psa2g3502 675 SMART arm_5 443 483 IPR000225 GO:0005515
Psa2g3502 675 SUPERFAMILY ARM repeat 153 620 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3502 Psa-Chr2 384529966 384532955 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3502 - - mtr:MTR_5g022240 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3502 2 384529966 384532955 Psa2g3502 2 384529966 384532955 ECH
Psa2g3502 2 384529966 384532955 Psa4g2336 4 188932529 188935054 PCT
Psa4g2334 4 188849518 188851241 Psa2g3502 2 384529966 384532955 PCT