Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2334 ATGGGGTTTTCAAAAAAAAGCACAACAACTGCAGATTTAGTAAAGCAGCTATTAGCAAAACCGATCCAACTAGCTGACCAAGTAATCAAAGCAGTTGATGAAGGAAGTTTATCGTTCAAACAAGAATGTTTAGTGGTCAAATCCAAAACAGAAAAACTCGCTTCACTTCTCCGACAAGCAGCAACGTCAAGCTCCGTTTTAAACGAACGACCAGCTCGTCGCATCATTGGCGACACCGAACAAGTCCTCGAAAAAGCACTCGCCTTAGTCCTCAAATGCAAAGTCAACGGTCTCATGAAGCGTGTTTTCAGCATAGTACCTTCCGCCGCTTTCCGCAAAATGTCTTCTCATCTCGAAAATTCAATCGGCGATGTTTCCTGGCTCCTCCGTGTCTCCGCTCCGACGGAGGAAGGTGGATACGAGTATCTAGGTCTTCCACCTATCGCTTCTAATGAACCGATTCTATGTCTAATTTGGGAACAGATTGCGATTCTTCATAATGGCTCTGTTGATGATCGATCTGATGCTGCTGCTTCTTTGGTTTCGCTTGTTTGCGATAACGGGAAATTGATAATTGAAGAAGGTGGTGTTGGTCCTTTGTTGAAACTTATTAAAGAAGGTAAAAAGGAAGGTCAAGAAAATGCTGCTAAAGCTATTGGGCTTTTGGGCAGAGACGCTGAAAGCGTTGATGTTATGATTCATGCCGGTGTTTGTTCGGTTTTCGCTAAGATTCTTAAAGAAGGTCCTATGAAAGTTCAAGCTGTTGTAGCTTGGGCTGTTTCTGAACTTGTTTCTAAGAATCCTAAATGTCATTCAAGTGGGATTGGAACGGTAATACCGAGCCAAGTTCTTTCGTATTCTGGCATTAACATCAACGGAATGGAACTTGAAGATTCGGAGAGTAAGGCTGACATGAAAGCAATGGCAGTGAAAGCTCTTATGTTTTTAGCAAAGGATAACTCTGCGATTTGTCGTAGCTTAATAGAATCAAGTGCTTTGTTATGCTTAGCTATTCTCCTTGACAAAGGACCTGAAGAAGTGAAGTACAATTCTGCCTTGGCATTGAAAGAGATTACTGCAGTGACTGAGAAAGACGAAGAGTTGAGAAGATCAGCGCTTAAGTCGAATTTTCCTGCTTGTAGAGCCATTGTTAATCAAGTGATCGATATTATTGACAAAGAAGATAAGAAACTTTTGATTCCTTGCATTAAGGTTATTGGGAGTTTGGCAAGGACATTCACGAAAAATGAGAAAAGGATAGTTGGTTCATTGGTTCGACTTCTCAACGAAAGAGAGGATGAGGTATCCAAAGAGGCTGCAGATTCACTCGCAAAAATTGCCTGCTATAATAACTACCTCCACCTCTATCACTCTAAGGCGATTATAAGCTCCGGTGGTGTAACACACTTGGTTCAACTTCTGTACTTTGGCGAGCAGTCAGTACAGCAATCAGCCTTGATTCTGCTATCCTATATTGCATTAAATGTGCCAGACAGTGAAGAACTTTCTAGGGCCGAGGTTCTTGGAGTTCTTGAATGGGCATCCAGACAACCTAATGTGACTCAAGATGAAACCACCATAGCTCTGTTTCAAGAATCCAAGTGTAGACTGGAGCTTTACCTGTCTAGAGGTTCAAGAGGGTTCCAAAATTAA 1653 0.4198 MGFSKKSTTTADLVKQLLAKPIQLADQVIKAVDEGSLSFKQECLVVKSKTEKLASLLRQAATSSSVLNERPARRIIGDTEQVLEKALALVLKCKVNGLMKRVFSIVPSAAFRKMSSHLENSIGDVSWLLRVSAPTEEGGYEYLGLPPIASNEPILCLIWEQIAILHNGSVDDRSDAAASLVSLVCDNGKLIIEEGGVGPLLKLIKEGKKEGQENAAKAIGLLGRDAESVDVMIHAGVCSVFAKILKEGPMKVQAVVAWAVSELVSKNPKCHSSGIGTVIPSQVLSYSGININGMELEDSESKADMKAMAVKALMFLAKDNSAICRSLIESSALLCLAILLDKGPEEVKYNSALALKEITAVTEKDEELRRSALKSNFPACRAIVNQVIDIIDKEDKKLLIPCIKVIGSLARTFTKNEKRIVGSLVRLLNEREDEVSKEAADSLAKIACYNNYLHLYHSKAIISSGGVTHLVQLLYFGEQSVQQSALILLSYIALNVPDSEELSRAEVLGVLEWASRQPNVTQDETTIALFQESKCRLELYLSRGSRGFQN* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2334 550 SMART arm_5 185 224 IPR000225 GO:0005515
Psa4g2334 550 SMART arm_5 320 360 IPR000225 GO:0005515
Psa4g2334 550 SMART arm_5 454 494 IPR000225 GO:0005515
Psa4g2334 550 SMART arm_5 225 265 IPR000225 GO:0005515
Psa4g2334 550 PANTHER ARMADILLO REPEAT ONLY 2 11 271 - -
Psa4g2334 550 PANTHER ARMADILLO REPEAT ONLY 2 283 548 - -
Psa4g2334 550 Gene3D - 12 131 IPR036537 GO:0007166
Psa4g2334 550 Gene3D - 377 526 IPR011989 -
Psa4g2334 550 Gene3D - 160 375 IPR011989 -
Psa4g2334 550 SUPERFAMILY ARM repeat 162 519 IPR016024 -
Psa4g2334 550 Pfam Armadillo/beta-catenin-like repeat 190 221 IPR000225 GO:0005515
Psa4g2334 550 PANTHER ARMADILLO REPEAT ONLY 4 283 548 - -
Psa4g2334 550 PANTHER ARMADILLO REPEAT ONLY 4 11 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2334 Psa-Chr4 188849518 188851241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2334 - - hbr:110663906 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2334 4 188849518 188851241 Psa2g3502 2 384529966 384532955 PCT