Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2336 ATGGCCGATTTAGTAAAACAGCTTTTAGCAAAACCGATCCAACTAGCTGACCAAGTAAGCAAAGCAGCCGAAGAAGGAAGCGCATCCTTCAAACAAGAATGCTTAGAACTCAAATCTAAAACAGAAAAACTCGCTTCACTTCTCCGACAAGCCGCAAGATCAAGCTCCGATTTATACGAACGACCAACCCGTCGCATCATCGGCGACACCGAACAAGTCCTCGAAAAAGCACTCGCCTTAGTCCTCAAATGCAAAGTCAACGGTCTCATGAAGCGTGTTTTCAGCATAGTACCTTCCGCCGCTTTCCGCAAAATGTCTTCTCATCTCGAAAATTCAATCGGCGATGTCTCCTGGCTCCTCCGTGTCTCCGCTCCGACGGAGGAAGGTGGATACGAGTGTCTAGGTCTTCCACCTATCGCTTCTAATGAACCGATTCTAGGTCTAATTTGGGAACAGATTGCGATTCTTCATAATGGCTCTATTGATGATCGATCTGATGCTGCTGCTTCTTTGGTTTCGCTTGTTCGCGATAACGATCGGAACGGGAAATTGATAATTGAAGAAGGTGGTGTTGGTCCTTTGTTGAAACTTATTAAAGAAGGTAAAAAGGAAGGGCAAGAAAATGCTGCTAAAGCTATTGGGCTTTTGGGCCGAGACGCTGAAAGCGTTGATGTTATGATTCATGCCGGTGTTTGTTCGGTTTTCGCCAAGATTCTTAAAGAAGGTCCTATGAAAGTTCAAGCTGTTGTAGCTTGGGCTGTTTCTGAACTTGTTTCTAAGAATCCTAAATGTCAAGATGTTTTTGCTCAGCATAATATTGTTAGGTTACTTGTTAGTCATATTGCATTTGAAACTGTTCAGGAGCATAGTAAATATGCAATTGTTAGTAATAAGCCGAATTCGATTCATGCTCTTGTGTTGGCTAGTGGTAATAGTAATAGTAATAATGGTGATAACTCTGGTTCTATTGATGTGAAAAAAGAGACCGAAGATGAGGTGAAGATTCGGATGCAGCATCCTTTAGGGGATAGGTCTACAAATCAGATGCATAAAGTGGTAGCAAGTACTATTGCAATGCATGCTGCAAATGCGAATAACAACAAGAATCAACAAACTAGTGTAGGGAATGAAGCGAGTCTGAACTCTCATTCTCAGGTGGCTAGTCATTCAAATGGGAGCGGGAACGGTGGTAATATGAAACAAAGCTATTCTTATTCTGGAATTAGCATGAAGGGAAGGGAACTTGAGGATGCTGAGAGTAAGGCTGAGATGAAAGCAATGGCTGCGAAAGCTCTTATGGTTCTAGCAAAGGATAACTCGGGGATTTGTCGTAGCATAACAGAATCAAGGGCTTTGTTATGCTTTGCTATTCTACTTGAAAAAGGACCTGAAGAAGTGAAGTACCATTCTGCCTTGGCATTGAAAGAGATTACTGCAGTGGCTGAGAAAGATCCTGAATTGAGAAGAATGGCATTTAAGCCGAATTCTCCTGCCTGTAAAGCAGTTGTTGATCAAGTGATCGATATTATCGACAAAGAAGATAAGAGACTTCTGATTCCTTGTATTAAGGCAATTGGAAGTTTGGCTAGGACATTCAGGGCAACCGAGACAAGGATAATCGGGCCGTTGGTTCGACTTCTCGACGAAAGAGAGGCTGAAGTATCCAAAGAAGCTGCAGACTCACTCACGAAATTTGCCTGCATTGACAACTACCTCCACCTTGATCACTCTAAGGCAATTATAAGCTCTGGTGGTGCAAAACACTTGGTTCAGCTTGTGTATCTTGGGGAGCAGCCGGTTCAATATTCAGCCTTGGTTCTGCTATCCTATATCGCATTGCACGTGCCAGACAGCGAAGAACTTGCTCGGGTTGAGGTTCTTGGAGTTCTTGAGTGGGCATCCAAGCAACTTAACGTGACTCAAGATGAAACCGTCGCCATGTTGTTGCAAGAGTCCAAGAGTAGGCTTGAGCTTTACCAGTCTAGAGGTTCAAGAGGGTTCCAAAAGTTACATCAATAG 2019 0.4334 MADLVKQLLAKPIQLADQVSKAAEEGSASFKQECLELKSKTEKLASLLRQAARSSSDLYERPTRRIIGDTEQVLEKALALVLKCKVNGLMKRVFSIVPSAAFRKMSSHLENSIGDVSWLLRVSAPTEEGGYECLGLPPIASNEPILGLIWEQIAILHNGSIDDRSDAAASLVSLVRDNDRNGKLIIEEGGVGPLLKLIKEGKKEGQENAAKAIGLLGRDAESVDVMIHAGVCSVFAKILKEGPMKVQAVVAWAVSELVSKNPKCQDVFAQHNIVRLLVSHIAFETVQEHSKYAIVSNKPNSIHALVLASGNSNSNNGDNSGSIDVKKETEDEVKIRMQHPLGDRSTNQMHKVVASTIAMHAANANNNKNQQTSVGNEASLNSHSQVASHSNGSGNGGNMKQSYSYSGISMKGRELEDAESKAEMKAMAAKALMVLAKDNSGICRSITESRALLCFAILLEKGPEEVKYHSALALKEITAVAEKDPELRRMAFKPNSPACKAVVDQVIDIIDKEDKRLLIPCIKAIGSLARTFRATETRIIGPLVRLLDEREAEVSKEAADSLTKFACIDNYLHLDHSKAIISSGGAKHLVQLVYLGEQPVQYSALVLLSYIALHVPDSEELARVEVLGVLEWASKQLNVTQDETVAMLLQESKSRLELYQSRGSRGFQKLHQ* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2336 672 Pfam Armadillo/beta-catenin-like repeat 183 215 IPR000225 GO:0005515
Psa4g2336 672 Gene3D - 5 122 IPR036537 GO:0007166
Psa4g2336 672 PANTHER - 1 667 - -
Psa4g2336 672 MobiDBLite consensus disorder prediction 373 398 - -
Psa4g2336 672 Gene3D - 413 652 IPR011989 -
Psa4g2336 672 Gene3D - 149 313 IPR011989 -
Psa4g2336 672 PANTHER ARMADILLO REPEAT ONLY 4 1 667 - -
Psa4g2336 672 SUPERFAMILY ARM repeat 153 630 IPR016024 -
Psa4g2336 672 SMART arm_5 439 479 IPR000225 GO:0005515
Psa4g2336 672 SMART arm_5 219 259 IPR000225 GO:0005515
Psa4g2336 672 SMART arm_5 177 218 IPR000225 GO:0005515
Psa4g2336 672 SMART arm_5 573 613 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2336 Psa-Chr4 188932529 188935054 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2336 - - mtr:MTR_8g075770 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3502 2 384529966 384532955 Psa4g2336 4 188932529 188935054 PCT