Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0128 ATGGGAGAGGAAGGAGTTATAGACAACACTCCCTTGATTGATCACTACTCATCTTCTGGCGAAGTTTTTGTTAACGAGTCTTTCAAAAGAACAGGTAACGTGTGGAGCGCGGTGGCGCATATAATAACCGGAGTGATAGGAGCAGGTGTACTGTCACTAGCATGGTCTGTGGCGCAATTAGGATGGATTGCAGGTCCTATCTGTATTCTAGTATTTGCAGCCACTACCCTCATTTCAACATACCTTCTTTCTGATTGTTATAGATTTCACCATCCTCAACATGGGAGCATTAGGTGCTCCTCCTACACGGATGCTGTCAATTTGTACCTTGGAGAAATAAAGGGAAAGGTGTGTGGAGTGTTGGTGCTTGTGAGCTTATATGGTGCTGCATGTGCCTATGTCATTACATCTGCTACCAGCATCAGAGCGATTTTGAAATCAAATTGTTACCATAAGGAAGGACATGAAGCACCTTGTAAATATGGGGATGCTATGTATATGTTGCTGTTTGGAGTTGTTCAGGTCATAATGTCATTCATACCAGATTTCCACAACATGGCATTGCTTTCGGTTGTTGCAGCTATTATGTCTTTTTCATACTCATCTATTGGACTAGGACTCGGCATCACAAAAGTTATAGAAAATGGAAGAGTTATGGGGAGCGTAACTGGAATACCAGCTTCAAATATTTCAGATAAGTTATGGTTAGTCTTCCAAGCACTTGGTGATATTGCTTTTGCCTATCCATACACTGTCATCCTCCTTGAGATACAGGATACTTTAAAGTCTCCTCCATCAGAAGACAAGACCATGAAAAAGGCTTCCATAATTGCAATCTCCATTACAACATTCTTCTACCTTTGTTGCGGGTGTTTTGGATATGCAGCTTTTGGAAACCAAACACCCGGAAACCTCTTGACAGGTTTTGGTTTTTACGAACCTTATTGGCTCATCGACTTTGCTAATGCTTGCATTGTTCTTCATTTGGTTGGAGGATATCAGATTTATAGTCAACCGATATATAGTGCTGCGGATAAATGGTGTTCAAGAAGATATCCCGACAGCGGTTTTGTGAATAGTTTCTTCAGATTGAAACTGCCTTTTTTACCGGCTTTTCAGCTAAACATGTCGCGGATATGTTTTAGAACAGCTTATGTGATTTCCACAACTGGACTTGCAATCATGTTTCCTTACTTCAATCAAGTTCTAGGAGTTCTAGGAGCAATAGGATTTTGGCCATTGATTATATATTTTCCAGTAGAGATGCATTTTGTACAGAATAAAGTTGAAGCTTGGTCTACAAAATGGATTCTTCTTAGGATTTTTAGCTTTGTTTGCTTTTTGATCACACTAGTGAGTCTTGTTGGATCACTTGAAGGAATCATAAGTCAGAAACTAAGCTGA 1404 0.401 MGEEGVIDNTPLIDHYSSSGEVFVNESFKRTGNVWSAVAHIITGVIGAGVLSLAWSVAQLGWIAGPICILVFAATTLISTYLLSDCYRFHHPQHGSIRCSSYTDAVNLYLGEIKGKVCGVLVLVSLYGAACAYVITSATSIRAILKSNCYHKEGHEAPCKYGDAMYMLLFGVVQVIMSFIPDFHNMALLSVVAAIMSFSYSSIGLGLGITKVIENGRVMGSVTGIPASNISDKLWLVFQALGDIAFAYPYTVILLEIQDTLKSPPSEDKTMKKASIIAISITTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIYSQPIYSAADKWCSRRYPDSGFVNSFFRLKLPFLPAFQLNMSRICFRTAYVISTTGLAIMFPYFNQVLGVLGAIGFWPLIIYFPVEMHFVQNKVEAWSTKWILLRIFSFVCFLITLVSLVGSLEGIISQKLS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0128 467 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 466 - -
Psa2g0128 467 PANTHER OS05G0424000 PROTEIN-RELATED 8 466 - -
Psa2g0128 467 Pfam Transmembrane amino acid transporter protein 31 462 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0128 Psa-Chr2 4889598 4892415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0128 25 462 Organic Solute Cotransporters AT5G09220 51.701 3.89e-173 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0128 K24917 - gmx:100786621 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0128 2 4889598 4892415 Psa2g0128 2 4889598 4892415 ECH
Psa5g3815 5 300752453 300756012 Psa2g0128 2 4889598 4892415 PCT
Psa2g0128 2 4889598 4892415 Psa5g3828 5 301463704 301468262 PCT